Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PAF1Q8N7H5 AC093503.3-201ENST00000624917 2352 ntBASIC18.63■□□□□ 0.57
PAF1Q8N7H5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.63■□□□□ 0.57
PAF1Q8N7H5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PAF1Q8N7H5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PAF1Q8N7H5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.62■□□□□ 0.57
PAF1Q8N7H5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.62■□□□□ 0.57
PAF1Q8N7H5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 AC005082.1-201ENST00000413042 2259 ntBASIC18.62■□□□□ 0.57
PAF1Q8N7H5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PAF1Q8N7H5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 AC093525.10-201ENST00000625130 1569 ntBASIC18.61■□□□□ 0.57
PAF1Q8N7H5 LINC01311-201ENST00000565162 1445 ntBASIC18.61■□□□□ 0.57
PAF1Q8N7H5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 CROCCP3-202ENST00000420820 1947 ntBASIC18.61■□□□□ 0.57
PAF1Q8N7H5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.61■□□□□ 0.57
PAF1Q8N7H5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 AL031598.1-201ENST00000561511 1773 ntBASIC18.6■□□□□ 0.57
PAF1Q8N7H5 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 KRT18P38-201ENST00000449496 1282 ntBASIC18.6■□□□□ 0.57
PAF1Q8N7H5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 AC126763.1-201ENST00000552015 2118 ntBASIC18.6■□□□□ 0.57
PAF1Q8N7H5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.6■□□□□ 0.57
PAF1Q8N7H5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms