Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 LINC01023-201ENST00000606054 436 ntBASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 AL157888.1-201ENST00000631930 593 ntBASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 AC007613.1-201ENST00000572811 2597 ntBASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 LTB4R2-202ENST00000528054 3092 ntBASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TTC9CQ8N5M4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 AC093010.1-201ENST00000473625 1624 ntBASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 AC073508.3-201ENST00000619697 1419 ntBASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 AL023973.1-201ENST00000624619 620 ntBASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TTC9CQ8N5M4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TTC9CQ8N5M4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TTC9CQ8N5M4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms