Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 EML3-212ENST00000494176 2901 ntTSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 EML3-216ENST00000529309 2909 ntTSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
SMC5Q8IY18 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMC5Q8IY18 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
SMC5Q8IY18 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMC5Q8IY18 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 AL391807.1-203ENST00000604392 2365 ntBASIC22.4■■□□□ 1.18
SMC5Q8IY18 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 AC034232.1-201ENST00000506026 1064 ntBASIC22.4■■□□□ 1.18
SMC5Q8IY18 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.4■■□□□ 1.18
SMC5Q8IY18 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMC5Q8IY18 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SMC5Q8IY18 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SMC5Q8IY18 AL355312.1-201ENST00000407115 2176 ntBASIC22.39■■□□□ 1.18
SMC5Q8IY18 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
SMC5Q8IY18 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SMC5Q8IY18 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
SMC5Q8IY18 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.39■■□□□ 1.18
SMC5Q8IY18 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMC5Q8IY18 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMC5Q8IY18 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 SPDYE15P-201ENST00000424157 909 ntBASIC22.39■■□□□ 1.17
SMC5Q8IY18 HLA-F-220ENST00000434407 884 ntBASIC22.39■■□□□ 1.17
SMC5Q8IY18 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMC5Q8IY18 AC024563.2-201ENST00000603282 481 ntBASIC22.39■■□□□ 1.17
SMC5Q8IY18 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMC5Q8IY18 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMC5Q8IY18 AC139713.2-201ENST00000641328 2723 ntBASIC22.39■■□□□ 1.17
SMC5Q8IY18 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.39■■□□□ 1.17
SMC5Q8IY18 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMC5Q8IY18 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMC5Q8IY18 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.39■■□□□ 1.17
SMC5Q8IY18 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMC5Q8IY18 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC22.38■■□□□ 1.17
SMC5Q8IY18 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms