Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FZD10-202ENST00000539839 3282 ntBASIC17.8■□□□□ 0.44
TRIM48Q8IWZ4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 AC007613.1-201ENST00000572811 2597 ntBASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 AC090616.6-201ENST00000582640 721 ntBASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 AP002414.4-201ENST00000589764 1148 ntBASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 IGHV3-41-201ENST00000613121 348 ntBASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM48Q8IWZ4 AC005332.8-201ENST00000622750 2735 ntBASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 NPAP1P7-201ENST00000613027 823 ntBASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM48Q8IWZ4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 SDHAP2-201ENST00000455183 2001 ntBASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 GUSBP12-201ENST00000513727 720 ntBASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM48Q8IWZ4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 AL353692.3-201ENST00000407031 1396 ntBASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM48Q8IWZ4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 LTB4R2-202ENST00000528054 3092 ntBASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 MIR3652-201ENST00000579335 131 ntBASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM48Q8IWZ4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms