Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC134043.2-201ENST00000624206 2238 ntBASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC009102.3-201ENST00000623118 1491 ntBASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 KRT18P23-201ENST00000435622 1283 ntBASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 AC008550.1-201ENST00000511500 884 ntBASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 MIR4785-201ENST00000585005 73 ntBASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 AP000525.1-201ENST00000608286 694 ntBASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 AL163051.1-201ENST00000569214 1512 ntBASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC50Q8IVM0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC50Q8IVM0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC50Q8IVM0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC50Q8IVM0 PHGDH-209ENST00000641074 1780 ntBASIC19.14■□□□□ 0.66
CCDC50Q8IVM0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 AL390955.1-201ENST00000428694 934 ntBASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 SLC25A1P2-201ENST00000430693 912 ntBASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC50Q8IVM0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 MIR149-201ENST00000384879 89 ntBASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 TSPY17P-201ENST00000450329 467 ntBASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC50Q8IVM0 SDHAP2-201ENST00000455183 2001 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms