Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF135Q8IUD6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 RPSAP43-201ENST00000402237 625 ntBASIC19.19■□□□□ 0.66
RNF135Q8IUD6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF135Q8IUD6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 KRT8P3-201ENST00000519669 1449 ntBASIC19.18■□□□□ 0.66
RNF135Q8IUD6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 BNIP3P18-201ENST00000593976 575 ntBASIC19.18■□□□□ 0.66
RNF135Q8IUD6 AC027601.4-201ENST00000611259 610 ntBASIC19.18■□□□□ 0.66
RNF135Q8IUD6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 AC093503.3-201ENST00000624917 2352 ntBASIC19.18■□□□□ 0.66
RNF135Q8IUD6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF135Q8IUD6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.17■□□□□ 0.66
RNF135Q8IUD6 AC132008.2-207ENST00000454517 770 ntBASIC19.17■□□□□ 0.66
RNF135Q8IUD6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 AC083906.6-201ENST00000641366 219 ntBASIC19.17■□□□□ 0.66
RNF135Q8IUD6 AC079781.4-201ENST00000641908 219 ntBASIC19.17■□□□□ 0.66
RNF135Q8IUD6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF135Q8IUD6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms