Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 AC111152.3-201ENST00000569699 673 ntBASIC17.31■□□□□ 0.36
RAB43Q86YS6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 NOC2LP2-201ENST00000407594 1944 ntBASIC17.31■□□□□ 0.36
RAB43Q86YS6 CROCCP3-202ENST00000420820 1947 ntBASIC17.31■□□□□ 0.36
RAB43Q86YS6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB43Q86YS6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB43Q86YS6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 AC006333.2-201ENST00000607957 2099 ntBASIC17.3■□□□□ 0.36
RAB43Q86YS6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 AP003733.1-201ENST00000491725 852 ntBASIC17.3■□□□□ 0.36
RAB43Q86YS6 MIR3180-1-201ENST00000580374 94 ntBASIC17.3■□□□□ 0.36
RAB43Q86YS6 MIR3180-3-201ENST00000584616 94 ntBASIC17.3■□□□□ 0.36
RAB43Q86YS6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB43Q86YS6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RAB43Q86YS6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 HTR7P1-202ENST00000624664 4411 ntBASIC17.29■□□□□ 0.36
RAB43Q86YS6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 AC026396.1-201ENST00000419388 421 ntBASIC17.29■□□□□ 0.36
RAB43Q86YS6 AP002383.4-201ENST00000442518 975 ntBASIC17.29■□□□□ 0.36
RAB43Q86YS6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB43Q86YS6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RAB43Q86YS6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms