Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 AC141586.5-201ENST00000624546 2050 ntBASIC18.74■□□□□ 0.59
CCDC25Q86WR0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 AL023284.2-201ENST00000405850 579 ntBASIC18.74■□□□□ 0.59
CCDC25Q86WR0 MCCD1P1-208ENST00000445732 328 ntBASIC18.74■□□□□ 0.59
CCDC25Q86WR0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 GPAT2P1-201ENST00000444924 1672 ntBASIC18.73■□□□□ 0.59
CCDC25Q86WR0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 ESRRAP1-201ENST00000400596 1257 ntBASIC18.73■□□□□ 0.59
CCDC25Q86WR0 AC011506.1-201ENST00000474329 610 ntBASIC18.73■□□□□ 0.59
CCDC25Q86WR0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 AC026271.3-201ENST00000571884 352 ntBASIC18.73■□□□□ 0.59
CCDC25Q86WR0 RN7SL471P-201ENST00000580476 299 ntBASIC18.73■□□□□ 0.59
CCDC25Q86WR0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 AC130371.2-201ENST00000619443 611 ntBASIC18.73■□□□□ 0.59
CCDC25Q86WR0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 AC034236.2-201ENST00000606662 1610 ntBASIC18.73■□□□□ 0.59
CCDC25Q86WR0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC25Q86WR0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 HLA-L-209ENST00000420110 1011 ntBASIC18.72■□□□□ 0.59
CCDC25Q86WR0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 AC090192.1-201ENST00000517740 490 ntBASIC18.72■□□□□ 0.59
CCDC25Q86WR0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 AC006116.8-202ENST00000587620 1550 ntBASIC18.72■□□□□ 0.59
CCDC25Q86WR0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC25Q86WR0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 FER1L4-210ENST00000615531 5998 ntBASIC18.71■□□□□ 0.59
CCDC25Q86WR0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CCDC25Q86WR0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms