Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PTCHD4Q6ZW05 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTCHD4Q6ZW05 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PTCHD4Q6ZW05 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.7■□□□□ 0.26
PTCHD4Q6ZW05 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 PRORSD1P-201ENST00000295112 541 ntBASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 KRT18P29-201ENST00000397031 1267 ntBASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PTCHD4Q6ZW05 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PTCHD4Q6ZW05 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms