Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 TBC1D3P5-201ENST00000579401 1545 ntBASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 AC004967.1-201ENST00000453589 447 ntBASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 AC108751.1-201ENST00000490852 363 ntBASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 AP001160.2-201ENST00000596071 487 ntBASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC141Q6ZP82 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 PMP22-202ENST00000395936 816 ntTSL 3 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 AC136632.2-201ENST00000512891 861 ntBASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 COPE-211ENST00000600932 1144 ntTSL 5 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 AC064836.3-201ENST00000607928 673 ntBASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 MIR1199-201ENST00000621445 119 ntBASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 BEX3-201ENST00000361298 921 ntTSL 2 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 URGCP-206ENST00000446958 365 ntTSL 2 BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC141Q6ZP82 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 AL353593.2-201ENST00000602529 1483 ntBASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 AC126763.1-201ENST00000552015 2118 ntBASIC26.86■■□□□ 1.89
CCDC141Q6ZP82 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 AC148477.5-201ENST00000625164 1645 ntBASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 HNRNPA1P28-201ENST00000424481 961 ntBASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CCDC141Q6ZP82 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 PHGDH-209ENST00000641074 1780 ntBASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 PRYP5-201ENST00000451909 266 ntBASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 COX5A-202ENST00000562233 441 ntTSL 3 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 AC073592.5-201ENST00000624854 528 ntBASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC141Q6ZP82 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms