Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 GNAS-203ENST00000306120 1878 ntBASIC18.52■□□□□ 0.55
CASC4Q6P4E1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CASC4Q6P4E1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 WWOX-216ENST00000569818 525 ntBASIC18.51■□□□□ 0.55
CASC4Q6P4E1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CASC4Q6P4E1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 AP000997.3-201ENST00000623333 2250 ntBASIC18.5■□□□□ 0.55
CASC4Q6P4E1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 AC007663.1-201ENST00000438948 1240 ntBASIC18.5■□□□□ 0.55
CASC4Q6P4E1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 AL355075.4-201ENST00000554988 638 ntBASIC18.5■□□□□ 0.55
CASC4Q6P4E1 AC009065.1-201ENST00000564055 1225 ntBASIC18.5■□□□□ 0.55
CASC4Q6P4E1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 AC112497.1-201ENST00000624824 639 ntBASIC18.5■□□□□ 0.55
CASC4Q6P4E1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASC4Q6P4E1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CASC4Q6P4E1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms