Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 POU5F1P3-201ENST00000428824 1078 ntBASIC14.42□□□□□ -0.1
FAM78BQ5VT40 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.42□□□□□ -0.1
FAM78BQ5VT40 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FAM78BQ5VT40 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 ESRRAP1-201ENST00000400596 1257 ntBASIC14.41□□□□□ -0.1
FAM78BQ5VT40 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 AC069544.1-201ENST00000609399 999 ntBASIC14.41□□□□□ -0.1
FAM78BQ5VT40 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
FAM78BQ5VT40 KRT8P11-201ENST00000409686 1436 ntBASIC14.41□□□□□ -0.1
FAM78BQ5VT40 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 AC108860.2-201ENST00000562760 2183 ntBASIC14.4□□□□□ -0.1
FAM78BQ5VT40 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FAM78BQ5VT40 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms