Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC178Q5BJE1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 AC233702.3-201ENST00000578656 1387 ntBASIC21.14■□□□□ 0.98
CCDC178Q5BJE1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 LINC00265-3P-201ENST00000447588 903 ntBASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 TOB2P1-201ENST00000469761 992 ntBASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC178Q5BJE1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 AC012615.1-201ENST00000565797 1299 ntBASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC178Q5BJE1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms