Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-BQ31612 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HLA-BQ31612 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-BQ31612 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-BQ31612 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-BQ31612 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-BQ31612 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.53■□□□□ 0.4
HLA-BQ31612 AC007967.3-201ENST00000434308 558 ntBASIC17.53■□□□□ 0.4
HLA-BQ31612 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-BQ31612 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 BX005266.1-201ENST00000473402 457 ntBASIC17.53■□□□□ 0.4
HLA-BQ31612 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-BQ31612 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-BQ31612 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-BQ31612 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-BQ31612 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-BQ31612 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-BQ31612 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
HLA-BQ31612 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.52■□□□□ 0.4
HLA-BQ31612 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HLA-BQ31612 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-BQ31612 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-BQ31612 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-BQ31612 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-BQ31612 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HLA-BQ31612 AC009947.1-201ENST00000444350 727 ntBASIC17.52■□□□□ 0.4
HLA-BQ31612 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-BQ31612 AC004967.1-201ENST00000453589 447 ntBASIC17.52■□□□□ 0.4
HLA-BQ31612 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.52■□□□□ 0.4
HLA-BQ31612 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.52■□□□□ 0.4
HLA-BQ31612 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-BQ31612 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-BQ31612 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-BQ31612 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.52■□□□□ 0.39
HLA-BQ31612 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-BQ31612 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-BQ31612 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-BQ31612 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HLA-BQ31612 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.52■□□□□ 0.39
HLA-BQ31612 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-BQ31612 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC097374.2-201ENST00000618617 1306 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-BQ31612 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 AC004832.2-201ENST00000426397 482 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 HMGN1P19-201ENST00000436976 333 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC002347.1-201ENST00000569543 541 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 AL355385.1-201ENST00000606123 409 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC134684.3-201ENST00000641758 218 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC005082.1-201ENST00000413042 2259 ntBASIC17.51■□□□□ 0.39
HLA-BQ31612 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-BQ31612 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HLA-BQ31612 AC079776.2-201ENST00000641154 1609 ntBASIC17.5■□□□□ 0.39
HLA-BQ31612 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-BQ31612 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-BQ31612 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-BQ31612 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HLA-BQ31612 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HLA-BQ31612 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-BQ31612 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-BQ31612 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-BQ31612 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-BQ31612 AC023274.1-201ENST00000418278 595 ntBASIC17.5■□□□□ 0.39
HLA-BQ31612 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-BQ31612 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-BQ31612 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-BQ31612 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-BQ31612 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms