Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.08■□□□□ 0.16
ODF4Q2M2E3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.08■□□□□ 0.16
ODF4Q2M2E3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.08■□□□□ 0.16
ODF4Q2M2E3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 KRT18P29-201ENST00000397031 1267 ntBASIC16.07■□□□□ 0.16
ODF4Q2M2E3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 AC097488.1-201ENST00000507834 756 ntBASIC16.07■□□□□ 0.16
ODF4Q2M2E3 KRT18P41-201ENST00000518924 1277 ntBASIC16.07■□□□□ 0.16
ODF4Q2M2E3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ODF4Q2M2E3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 AP000593.1-201ENST00000393668 712 ntBASIC16.06■□□□□ 0.16
ODF4Q2M2E3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ODF4Q2M2E3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 AC036111.1-201ENST00000533973 1582 ntBASIC16.05■□□□□ 0.16
ODF4Q2M2E3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 AC096733.2-201ENST00000609937 1394 ntBASIC16.05■□□□□ 0.16
ODF4Q2M2E3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 CRYGFP-201ENST00000418459 633 ntBASIC16.05■□□□□ 0.16
ODF4Q2M2E3 TSPY20P-201ENST00000450910 630 ntBASIC16.05■□□□□ 0.16
ODF4Q2M2E3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.05■□□□□ 0.16
ODF4Q2M2E3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms