Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRPFP62306 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRPFP62306 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRPFP62306 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SNRPFP62306 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRPFP62306 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.68■□□□□ 0.74
SNRPFP62306 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.68■□□□□ 0.74
SNRPFP62306 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.68■□□□□ 0.74
SNRPFP62306 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SNRPFP62306 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
SNRPFP62306 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNRPFP62306 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SNRPFP62306 AC068472.1-201ENST00000474589 881 ntBASIC19.67■□□□□ 0.74
SNRPFP62306 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.67■□□□□ 0.74
SNRPFP62306 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.67■□□□□ 0.74
SNRPFP62306 KRT8P26-201ENST00000534154 1276 ntBASIC19.67■□□□□ 0.74
SNRPFP62306 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 AC087388.1-201ENST00000571370 1112 ntBASIC19.67■□□□□ 0.74
SNRPFP62306 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.67■□□□□ 0.74
SNRPFP62306 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SNRPFP62306 AC116407.2-201ENST00000613639 860 ntBASIC19.67■□□□□ 0.74
SNRPFP62306 AC116407.4-201ENST00000623319 1061 ntBASIC19.67■□□□□ 0.74
SNRPFP62306 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 AC005332.1-201ENST00000577698 1310 ntBASIC19.67■□□□□ 0.74
SNRPFP62306 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.67■□□□□ 0.74
SNRPFP62306 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNRPFP62306 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNRPFP62306 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRPFP62306 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNRPFP62306 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNRPFP62306 TSPY22P-201ENST00000427496 604 ntBASIC19.66■□□□□ 0.74
SNRPFP62306 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRPFP62306 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRPFP62306 GUSBP12-201ENST00000513727 720 ntBASIC19.66■□□□□ 0.74
SNRPFP62306 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SNRPFP62306 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRPFP62306 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.66■□□□□ 0.74
SNRPFP62306 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRPFP62306 AC090616.6-201ENST00000582640 721 ntBASIC19.66■□□□□ 0.74
SNRPFP62306 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRPFP62306 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRPFP62306 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRPFP62306 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNRPFP62306 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.66■□□□□ 0.74
SNRPFP62306 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRPFP62306 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRPFP62306 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRPFP62306 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRPFP62306 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNRPFP62306 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.65■□□□□ 0.74
SNRPFP62306 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms