Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.9■□□□□ 0.14
SEC61A1P61619 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SEC61A1P61619 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.9■□□□□ 0.14
SEC61A1P61619 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61A1P61619 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
SEC61A1P61619 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SEC61A1P61619 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SEC61A1P61619 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.89■□□□□ 0.13
SEC61A1P61619 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.89■□□□□ 0.13
SEC61A1P61619 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SEC61A1P61619 ANO7L1-203ENST00000602586 1720 ntBASIC15.89■□□□□ 0.13
SEC61A1P61619 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.89■□□□□ 0.13
SEC61A1P61619 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SEC61A1P61619 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.89■□□□□ 0.13
SEC61A1P61619 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 AL137013.1-201ENST00000432946 1228 ntBASIC15.89■□□□□ 0.13
SEC61A1P61619 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.89■□□□□ 0.13
SEC61A1P61619 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.89■□□□□ 0.13
SEC61A1P61619 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.89■□□□□ 0.13
SEC61A1P61619 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.89■□□□□ 0.13
SEC61A1P61619 AC010331.1-201ENST00000611423 582 ntBASIC15.89■□□□□ 0.13
SEC61A1P61619 AC083906.6-201ENST00000641366 219 ntBASIC15.89■□□□□ 0.13
SEC61A1P61619 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SEC61A1P61619 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.89■□□□□ 0.13
SEC61A1P61619 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SEC61A1P61619 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.89■□□□□ 0.13
SEC61A1P61619 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61A1P61619 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.89■□□□□ 0.13
SEC61A1P61619 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
SEC61A1P61619 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.88■□□□□ 0.13
SEC61A1P61619 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.88■□□□□ 0.13
SEC61A1P61619 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.88■□□□□ 0.13
SEC61A1P61619 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
SEC61A1P61619 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
SEC61A1P61619 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.88■□□□□ 0.13
SEC61A1P61619 AC128688.1-201ENST00000487626 519 ntBASIC15.88■□□□□ 0.13
SEC61A1P61619 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.88■□□□□ 0.13
SEC61A1P61619 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SEC61A1P61619 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.88■□□□□ 0.13
SEC61A1P61619 AC092865.7-201ENST00000641832 219 ntBASIC15.88■□□□□ 0.13
SEC61A1P61619 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.88■□□□□ 0.13
SEC61A1P61619 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SEC61A1P61619 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.88■□□□□ 0.13
SEC61A1P61619 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SEC61A1P61619 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SEC61A1P61619 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.87■□□□□ 0.13
SEC61A1P61619 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SEC61A1P61619 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SEC61A1P61619 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SEC61A1P61619 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SEC61A1P61619 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.87■□□□□ 0.13
SEC61A1P61619 AC073508.3-201ENST00000619697 1419 ntBASIC15.87■□□□□ 0.13
SEC61A1P61619 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SEC61A1P61619 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SEC61A1P61619 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.87■□□□□ 0.13
SEC61A1P61619 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.87■□□□□ 0.13
SEC61A1P61619 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SEC61A1P61619 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SEC61A1P61619 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms