Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB38P57729 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.02■□□□□ 0.32
RAB38P57729 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB38P57729 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB38P57729 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RAB38P57729 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
RAB38P57729 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB38P57729 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB38P57729 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB38P57729 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB38P57729 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB38P57729 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB38P57729 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
RAB38P57729 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB38P57729 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB38P57729 NEFHP1-201ENST00000412845 2629 ntBASIC17.01■□□□□ 0.31
RAB38P57729 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 FLJ13224-201ENST00000313737 1514 ntBASIC17.01■□□□□ 0.31
RAB38P57729 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB38P57729 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
RAB38P57729 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAB38P57729 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB38P57729 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RAB38P57729 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB38P57729 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
RAB38P57729 CHCHD2P8-201ENST00000429873 447 ntBASIC17.01■□□□□ 0.31
RAB38P57729 AC090616.6-201ENST00000582640 721 ntBASIC17.01■□□□□ 0.31
RAB38P57729 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 AC069148.1-201ENST00000608741 768 ntBASIC17.01■□□□□ 0.31
RAB38P57729 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RAB38P57729 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB38P57729 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB38P57729 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RAB38P57729 AC016734.2-201ENST00000624325 1377 ntBASIC17.01■□□□□ 0.31
RAB38P57729 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB38P57729 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17■□□□□ 0.31
RAB38P57729 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAB38P57729 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 AC022898.2-201ENST00000616822 1312 ntBASIC17■□□□□ 0.31
RAB38P57729 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB38P57729 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17■□□□□ 0.31
RAB38P57729 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17■□□□□ 0.31
RAB38P57729 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 TSSC2-201ENST00000450217 709 ntBASIC17■□□□□ 0.31
RAB38P57729 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17■□□□□ 0.31
RAB38P57729 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17■□□□□ 0.31
RAB38P57729 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RAB38P57729 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 IGHV3-41-201ENST00000613121 348 ntBASIC17■□□□□ 0.31
RAB38P57729 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAB38P57729 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 AL390961.4-201ENST00000623958 2535 ntBASIC17■□□□□ 0.31
RAB38P57729 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17■□□□□ 0.31
RAB38P57729 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB38P57729 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17■□□□□ 0.31
RAB38P57729 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB38P57729 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB38P57729 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB38P57729 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB38P57729 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB38P57729 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB38P57729 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB38P57729 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB38P57729 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms