Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH13P55290 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH13P55290 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH13P55290 TSPY15P-201ENST00000457163 923 ntBASIC17.75■□□□□ 0.43
CDH13P55290 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH13P55290 AC104390.1-201ENST00000555663 520 ntBASIC17.75■□□□□ 0.43
CDH13P55290 C2orf69P3-201ENST00000565542 1120 ntBASIC17.75■□□□□ 0.43
CDH13P55290 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 TMEM191A-211ENST00000637163 1067 ntBASIC17.75■□□□□ 0.43
CDH13P55290 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.75■□□□□ 0.43
CDH13P55290 AL024508.2-201ENST00000607749 1894 ntBASIC17.75■□□□□ 0.43
CDH13P55290 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDH13P55290 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH13P55290 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDH13P55290 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH13P55290 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH13P55290 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.74■□□□□ 0.43
CDH13P55290 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH13P55290 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH13P55290 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH13P55290 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH13P55290 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 OR6D1P-202ENST00000641007 5290 ntBASIC17.74■□□□□ 0.43
CDH13P55290 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH13P55290 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH13P55290 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH13P55290 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH13P55290 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH13P55290 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH13P55290 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.73■□□□□ 0.43
CDH13P55290 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH13P55290 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH13P55290 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH13P55290 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDH13P55290 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH13P55290 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDH13P55290 AC012313.1-201ENST00000593393 3059 ntBASIC17.73■□□□□ 0.43
CDH13P55290 KRT8P9-201ENST00000558927 1449 ntBASIC17.72■□□□□ 0.43
CDH13P55290 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH13P55290 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH13P55290 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH13P55290 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH13P55290 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms