Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH6P55285 AC073508.3-201ENST00000619697 1419 ntBASIC18.88■□□□□ 0.61
CDH6P55285 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH6P55285 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CDH6P55285 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH6P55285 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH6P55285 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH6P55285 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 AC005521.1-201ENST00000393351 872 ntBASIC18.87■□□□□ 0.61
CDH6P55285 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH6P55285 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CDH6P55285 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDH6P55285 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH6P55285 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH6P55285 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH6P55285 AL441883.1-201ENST00000566170 1045 ntBASIC18.87■□□□□ 0.61
CDH6P55285 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH6P55285 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH6P55285 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH6P55285 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDH6P55285 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH6P55285 AL031432.5-201ENST00000641059 760 ntBASIC18.87■□□□□ 0.61
CDH6P55285 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH6P55285 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH6P55285 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH6P55285 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH6P55285 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH6P55285 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDH6P55285 BX664615.1-201ENST00000443558 458 ntBASIC18.86■□□□□ 0.61
CDH6P55285 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH6P55285 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH6P55285 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDH6P55285 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH6P55285 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDH6P55285 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH6P55285 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CDH6P55285 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH6P55285 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH6P55285 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH6P55285 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CDH6P55285 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 SLC25A6P5-201ENST00000435663 894 ntBASIC18.85■□□□□ 0.61
CDH6P55285 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.85■□□□□ 0.61
CDH6P55285 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH6P55285 AC139887.4-201ENST00000607877 719 ntBASIC18.85■□□□□ 0.61
CDH6P55285 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDH6P55285 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDH6P55285 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDH6P55285 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH6P55285 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH6P55285 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH6P55285 AC026471.1-201ENST00000564629 3026 ntBASIC18.84■□□□□ 0.61
CDH6P55285 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH6P55285 PCDHB18P-201ENST00000524813 2368 ntBASIC18.84■□□□□ 0.61
CDH6P55285 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms