Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC093677.2-201ENST00000600169 1863 ntBASIC17.22■□□□□ 0.35
NR1H2P55055 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.21■□□□□ 0.35
NR1H2P55055 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NR1H2P55055 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NR1H2P55055 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.21■□□□□ 0.35
NR1H2P55055 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.21■□□□□ 0.35
NR1H2P55055 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NR1H2P55055 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NR1H2P55055 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.21■□□□□ 0.35
NR1H2P55055 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.21■□□□□ 0.35
NR1H2P55055 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.21■□□□□ 0.35
NR1H2P55055 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.21■□□□□ 0.35
NR1H2P55055 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
NR1H2P55055 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.21■□□□□ 0.35
NR1H2P55055 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.21■□□□□ 0.35
NR1H2P55055 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.21■□□□□ 0.35
NR1H2P55055 AC073195.1-201ENST00000607241 877 ntBASIC17.21■□□□□ 0.35
NR1H2P55055 AC010331.1-201ENST00000611423 582 ntBASIC17.21■□□□□ 0.35
NR1H2P55055 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NR1H2P55055 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NR1H2P55055 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NR1H2P55055 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.21■□□□□ 0.34
NR1H2P55055 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.21■□□□□ 0.34
NR1H2P55055 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.21■□□□□ 0.34
NR1H2P55055 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
NR1H2P55055 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NR1H2P55055 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NR1H2P55055 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.2■□□□□ 0.34
NR1H2P55055 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NR1H2P55055 AP002982.1-201ENST00000492365 877 ntBASIC17.2■□□□□ 0.34
NR1H2P55055 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.2■□□□□ 0.34
NR1H2P55055 CD177P1-201ENST00000606252 935 ntBASIC17.2■□□□□ 0.34
NR1H2P55055 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 AL023806.1-201ENST00000603994 1649 ntBASIC17.2■□□□□ 0.34
NR1H2P55055 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.2■□□□□ 0.34
NR1H2P55055 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NR1H2P55055 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.2■□□□□ 0.34
NR1H2P55055 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NR1H2P55055 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.19■□□□□ 0.34
NR1H2P55055 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
NR1H2P55055 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.19■□□□□ 0.34
NR1H2P55055 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NR1H2P55055 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms