Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 AL158047.1-201ENST00000445918 881 ntBASIC18.61■□□□□ 0.57
ITGA8P53708 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.61■□□□□ 0.57
ITGA8P53708 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.61■□□□□ 0.57
ITGA8P53708 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ITGA8P53708 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA8P53708 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.61■□□□□ 0.57
ITGA8P53708 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ITGA8P53708 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA8P53708 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.61■□□□□ 0.57
ITGA8P53708 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITGA8P53708 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 AL024508.2-201ENST00000607749 1894 ntBASIC18.6■□□□□ 0.57
ITGA8P53708 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 KRT8P7-201ENST00000533003 1432 ntBASIC18.6■□□□□ 0.57
ITGA8P53708 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 GCSHP5-201ENST00000443090 522 ntBASIC18.6■□□□□ 0.57
ITGA8P53708 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.6■□□□□ 0.57
ITGA8P53708 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.6■□□□□ 0.57
ITGA8P53708 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.6■□□□□ 0.57
ITGA8P53708 AC142381.4-202ENST00000563973 229 ntBASIC18.6■□□□□ 0.57
ITGA8P53708 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.6■□□□□ 0.57
ITGA8P53708 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
ITGA8P53708 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.6■□□□□ 0.57
ITGA8P53708 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ITGA8P53708 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ITGA8P53708 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.59■□□□□ 0.57
ITGA8P53708 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.59■□□□□ 0.57
ITGA8P53708 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.59■□□□□ 0.57
ITGA8P53708 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.59■□□□□ 0.57
ITGA8P53708 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.59■□□□□ 0.57
ITGA8P53708 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.59■□□□□ 0.57
ITGA8P53708 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.59■□□□□ 0.57
ITGA8P53708 REXO1L10P-201ENST00000615707 1290 ntBASIC18.59■□□□□ 0.57
ITGA8P53708 REXO1L12P-201ENST00000622156 912 ntBASIC18.59■□□□□ 0.57
ITGA8P53708 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 AL355312.1-201ENST00000407115 2176 ntBASIC18.59■□□□□ 0.57
ITGA8P53708 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.59■□□□□ 0.57
ITGA8P53708 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ITGA8P53708 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ITGA8P53708 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.58■□□□□ 0.57
ITGA8P53708 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
ITGA8P53708 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ITGA8P53708 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ITGA8P53708 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.58■□□□□ 0.56
ITGA8P53708 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ITGA8P53708 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.58■□□□□ 0.56
ITGA8P53708 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
ITGA8P53708 CR769767.2-201ENST00000622735 460 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms