Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.88■□□□□ 0.45
LIMK1P53667 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LIMK1P53667 AC211486.1-202ENST00000416371 468 ntBASIC17.88■□□□□ 0.45
LIMK1P53667 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK1P53667 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.88■□□□□ 0.45
LIMK1P53667 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK1P53667 AC211476.1-201ENST00000503899 468 ntBASIC17.88■□□□□ 0.45
LIMK1P53667 RFPL4AP1-201ENST00000530883 850 ntBASIC17.88■□□□□ 0.45
LIMK1P53667 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.88■□□□□ 0.45
LIMK1P53667 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.88■□□□□ 0.45
LIMK1P53667 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.88■□□□□ 0.45
LIMK1P53667 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.88■□□□□ 0.45
LIMK1P53667 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LIMK1P53667 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK1P53667 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LIMK1P53667 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
LIMK1P53667 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LIMK1P53667 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.88■□□□□ 0.45
LIMK1P53667 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LIMK1P53667 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.88■□□□□ 0.45
LIMK1P53667 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LIMK1P53667 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 RPS2P1-201ENST00000434010 821 ntBASIC17.87■□□□□ 0.45
LIMK1P53667 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.87■□□□□ 0.45
LIMK1P53667 OR7E14P-202ENST00000530490 1290 ntBASIC17.87■□□□□ 0.45
LIMK1P53667 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.87■□□□□ 0.45
LIMK1P53667 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LIMK1P53667 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
LIMK1P53667 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK1P53667 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK1P53667 AC112777.1-201ENST00000540175 1423 ntBASIC17.87■□□□□ 0.45
LIMK1P53667 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.87■□□□□ 0.45
LIMK1P53667 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.87■□□□□ 0.45
LIMK1P53667 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.87■□□□□ 0.45
LIMK1P53667 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.87■□□□□ 0.45
LIMK1P53667 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LIMK1P53667 AC007613.1-201ENST00000572811 2597 ntBASIC17.86■□□□□ 0.45
LIMK1P53667 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LIMK1P53667 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LIMK1P53667 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.86■□□□□ 0.45
LIMK1P53667 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 AC006333.2-201ENST00000607957 2099 ntBASIC17.86■□□□□ 0.45
LIMK1P53667 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LIMK1P53667 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LIMK1P53667 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LIMK1P53667 AC244107.1-201ENST00000442033 332 ntBASIC17.86■□□□□ 0.45
LIMK1P53667 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.86■□□□□ 0.45
LIMK1P53667 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.86■□□□□ 0.45
LIMK1P53667 AC009533.2-201ENST00000543664 586 ntBASIC17.86■□□□□ 0.45
LIMK1P53667 SART3-203ENST00000546611 1184 ntBASIC17.86■□□□□ 0.45
LIMK1P53667 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.86■□□□□ 0.45
LIMK1P53667 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.86■□□□□ 0.45
LIMK1P53667 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.86■□□□□ 0.45
LIMK1P53667 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LIMK1P53667 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.86■□□□□ 0.45
LIMK1P53667 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.86■□□□□ 0.45
LIMK1P53667 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LIMK1P53667 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.86■□□□□ 0.45
LIMK1P53667 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.86■□□□□ 0.45
LIMK1P53667 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LIMK1P53667 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LIMK1P53667 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms