Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 VENTXP7-201ENST00000475503 772 ntBASIC17.59■□□□□ 0.41
PDX1P52945 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.59■□□□□ 0.41
PDX1P52945 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PDX1P52945 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PDX1P52945 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.59■□□□□ 0.41
PDX1P52945 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.59■□□□□ 0.41
PDX1P52945 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.59■□□□□ 0.41
PDX1P52945 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.59■□□□□ 0.41
PDX1P52945 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PDX1P52945 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDX1P52945 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.59■□□□□ 0.41
PDX1P52945 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PDX1P52945 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PDX1P52945 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDX1P52945 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.41
PDX1P52945 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
PDX1P52945 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.58■□□□□ 0.41
PDX1P52945 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PDX1P52945 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDX1P52945 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.58■□□□□ 0.4
PDX1P52945 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
PDX1P52945 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.58■□□□□ 0.4
PDX1P52945 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.58■□□□□ 0.4
PDX1P52945 RNA5SP419-201ENST00000515908 135 ntBASIC17.58■□□□□ 0.4
PDX1P52945 AC009065.1-201ENST00000564055 1225 ntBASIC17.58■□□□□ 0.4
PDX1P52945 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.58■□□□□ 0.4
PDX1P52945 BNIP3P18-201ENST00000593976 575 ntBASIC17.58■□□□□ 0.4
PDX1P52945 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDX1P52945 AC120114.3-201ENST00000611923 658 ntBASIC17.58■□□□□ 0.4
PDX1P52945 AC006538.3-201ENST00000612495 578 ntBASIC17.58■□□□□ 0.4
PDX1P52945 AC083906.6-201ENST00000641366 219 ntBASIC17.58■□□□□ 0.4
PDX1P52945 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.58■□□□□ 0.4
PDX1P52945 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDX1P52945 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDX1P52945 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.58■□□□□ 0.4
PDX1P52945 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.58■□□□□ 0.4
PDX1P52945 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PDX1P52945 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDX1P52945 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.57■□□□□ 0.4
PDX1P52945 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDX1P52945 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.57■□□□□ 0.4
PDX1P52945 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.57■□□□□ 0.4
PDX1P52945 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.57■□□□□ 0.4
PDX1P52945 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.57■□□□□ 0.4
PDX1P52945 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.57■□□□□ 0.4
PDX1P52945 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.57■□□□□ 0.4
PDX1P52945 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.57■□□□□ 0.4
PDX1P52945 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.57■□□□□ 0.4
PDX1P52945 BX640515.1-201ENST00000617215 977 ntBASIC17.57■□□□□ 0.4
PDX1P52945 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.57■□□□□ 0.4
PDX1P52945 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 BCL2-203ENST00000589955 5011 ntBASIC17.57■□□□□ 0.4
PDX1P52945 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.57■□□□□ 0.4
PDX1P52945 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDX1P52945 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDX1P52945 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
PDX1P52945 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PDX1P52945 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PDX1P52945 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDX1P52945 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms