Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 AC022898.2-201ENST00000616822 1312 ntBASIC16.54■□□□□ 0.24
HMGA2P52926 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 FAM197Y4-202ENST00000622692 608 ntBASIC16.54■□□□□ 0.24
HMGA2P52926 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGA2P52926 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CROCCP2-202ENST00000412962 2773 ntBASIC16.53■□□□□ 0.24
HMGA2P52926 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 ABHD17AP1-201ENST00000358206 933 ntBASIC16.53■□□□□ 0.24
HMGA2P52926 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMGA2P52926 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.53■□□□□ 0.24
HMGA2P52926 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGA2P52926 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGA2P52926 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGA2P52926 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 AC124067.4-201ENST00000519691 2379 ntBASIC16.52■□□□□ 0.24
HMGA2P52926 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
HMGA2P52926 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HMGA2P52926 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGA2P52926 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGA2P52926 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.52■□□□□ 0.24
HMGA2P52926 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HMGA2P52926 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.52■□□□□ 0.24
HMGA2P52926 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGA2P52926 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.52■□□□□ 0.24
HMGA2P52926 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGA2P52926 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.52■□□□□ 0.24
HMGA2P52926 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms