Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL137013.1-201ENST00000432946 1228 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RNF144AP50876 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF144AP50876 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RNF144AP50876 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RNF144AP50876 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF144AP50876 AC104390.1-201ENST00000555663 520 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF144AP50876 AC139887.4-201ENST00000607877 719 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 AC012306.2-201ENST00000609350 630 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 AL138966.2-201ENST00000621997 464 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.87■□□□□ 0.29
RNF144AP50876 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF144AP50876 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RNF144AP50876 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
RNF144AP50876 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RNF144AP50876 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
RNF144AP50876 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF144AP50876 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF144AP50876 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 AC113347.1-201ENST00000413321 391 ntBASIC16.86■□□□□ 0.29
RNF144AP50876 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.86■□□□□ 0.29
RNF144AP50876 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RNF144AP50876 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF144AP50876 AC097493.4-201ENST00000641197 219 ntBASIC16.86■□□□□ 0.29
RNF144AP50876 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF144AP50876 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF144AP50876 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF144AP50876 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF144AP50876 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF144AP50876 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF144AP50876 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNF144AP50876 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF144AP50876 AL441883.1-201ENST00000566170 1045 ntBASIC16.85■□□□□ 0.29
RNF144AP50876 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.85■□□□□ 0.29
RNF144AP50876 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
RNF144AP50876 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNF144AP50876 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RNF144AP50876 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF144AP50876 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF144AP50876 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RNF144AP50876 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF144AP50876 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF144AP50876 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF144AP50876 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF144AP50876 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RNF144AP50876 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms