Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
KNTC1P50748 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KNTC1P50748 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.18■□□□□ 0.34
KNTC1P50748 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KNTC1P50748 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KNTC1P50748 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.18■□□□□ 0.34
KNTC1P50748 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KNTC1P50748 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KNTC1P50748 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KNTC1P50748 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KNTC1P50748 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KNTC1P50748 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KNTC1P50748 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.17■□□□□ 0.34
KNTC1P50748 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.17■□□□□ 0.34
KNTC1P50748 RNA5SP416-201ENST00000516838 111 ntBASIC17.17■□□□□ 0.34
KNTC1P50748 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.17■□□□□ 0.34
KNTC1P50748 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.17■□□□□ 0.34
KNTC1P50748 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.17■□□□□ 0.34
KNTC1P50748 AC008687.5-201ENST00000593746 558 ntBASIC17.17■□□□□ 0.34
KNTC1P50748 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.17■□□□□ 0.34
KNTC1P50748 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.17■□□□□ 0.34
KNTC1P50748 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KNTC1P50748 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
KNTC1P50748 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
KNTC1P50748 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
KNTC1P50748 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.17■□□□□ 0.34
KNTC1P50748 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.17■□□□□ 0.34
KNTC1P50748 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
KNTC1P50748 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KNTC1P50748 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
KNTC1P50748 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.17■□□□□ 0.34
KNTC1P50748 AP006288.1-201ENST00000446065 395 ntBASIC17.17■□□□□ 0.34
KNTC1P50748 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.17■□□□□ 0.34
KNTC1P50748 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KNTC1P50748 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.17■□□□□ 0.34
KNTC1P50748 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KNTC1P50748 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KNTC1P50748 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.16■□□□□ 0.34
KNTC1P50748 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.16■□□□□ 0.34
KNTC1P50748 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 METTL21AP1-201ENST00000438852 635 ntBASIC17.16■□□□□ 0.34
KNTC1P50748 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.16■□□□□ 0.34
KNTC1P50748 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.16■□□□□ 0.34
KNTC1P50748 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.16■□□□□ 0.34
KNTC1P50748 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.16■□□□□ 0.34
KNTC1P50748 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.16■□□□□ 0.34
KNTC1P50748 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KNTC1P50748 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KNTC1P50748 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KNTC1P50748 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KNTC1P50748 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 AC096633.1-201ENST00000422446 749 ntBASIC17.16■□□□□ 0.34
KNTC1P50748 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.16■□□□□ 0.34
KNTC1P50748 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.16■□□□□ 0.34
KNTC1P50748 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.16■□□□□ 0.34
KNTC1P50748 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
KNTC1P50748 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.16■□□□□ 0.34
KNTC1P50748 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 AC005082.1-201ENST00000413042 2259 ntBASIC17.16■□□□□ 0.34
KNTC1P50748 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KNTC1P50748 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.15■□□□□ 0.34
KNTC1P50748 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 AC097374.2-201ENST00000618617 1306 ntBASIC17.15■□□□□ 0.34
KNTC1P50748 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
KNTC1P50748 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KNTC1P50748 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KNTC1P50748 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
KNTC1P50748 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
KNTC1P50748 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.15■□□□□ 0.34
KNTC1P50748 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.15■□□□□ 0.34
KNTC1P50748 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
KNTC1P50748 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.15■□□□□ 0.34
KNTC1P50748 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.15■□□□□ 0.34
KNTC1P50748 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.15■□□□□ 0.34
KNTC1P50748 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
KNTC1P50748 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.15■□□□□ 0.34
KNTC1P50748 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.15■□□□□ 0.34
KNTC1P50748 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KNTC1P50748 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms