Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6CP48668 AC134043.2-201ENST00000624206 2238 ntBASIC17.59■□□□□ 0.41
KRT6CP48668 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRT6CP48668 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6CP48668 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT6CP48668 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6CP48668 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
KRT6CP48668 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KRT6CP48668 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.59■□□□□ 0.41
KRT6CP48668 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.59■□□□□ 0.41
KRT6CP48668 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6CP48668 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
KRT6CP48668 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6CP48668 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KRT6CP48668 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6CP48668 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6CP48668 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT6CP48668 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT6CP48668 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
KRT6CP48668 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.58■□□□□ 0.41
KRT6CP48668 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT6CP48668 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
KRT6CP48668 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
KRT6CP48668 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT6CP48668 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
KRT6CP48668 LINC01126-201ENST00000623515 1646 ntBASIC17.58■□□□□ 0.41
KRT6CP48668 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT6CP48668 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT6CP48668 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.58■□□□□ 0.41
KRT6CP48668 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT6CP48668 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.58■□□□□ 0.41
KRT6CP48668 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6CP48668 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
KRT6CP48668 MMP23A-201ENST00000234610 1017 ntBASIC17.58■□□□□ 0.4
KRT6CP48668 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6CP48668 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6CP48668 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.58■□□□□ 0.4
KRT6CP48668 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.58■□□□□ 0.4
KRT6CP48668 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.58■□□□□ 0.4
KRT6CP48668 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KRT6CP48668 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT6CP48668 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT6CP48668 AP000997.3-201ENST00000623333 2250 ntBASIC17.58■□□□□ 0.4
KRT6CP48668 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT6CP48668 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 CYP2D8P-201ENST00000433633 1490 ntBASIC17.57■□□□□ 0.4
KRT6CP48668 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRT6CP48668 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT6CP48668 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT6CP48668 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
KRT6CP48668 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KRT6CP48668 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.57■□□□□ 0.4
KRT6CP48668 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT6CP48668 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT6CP48668 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT6CP48668 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
KRT6CP48668 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
KRT6CP48668 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT6CP48668 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms