Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.86■□□□□ 0.61
MMP13P45452 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.86■□□□□ 0.61
MMP13P45452 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.86■□□□□ 0.61
MMP13P45452 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MMP13P45452 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MMP13P45452 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
MMP13P45452 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.86■□□□□ 0.61
MMP13P45452 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP13P45452 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP13P45452 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 AC080080.1-201ENST00000625121 2420 ntBASIC18.85■□□□□ 0.61
MMP13P45452 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP13P45452 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP13P45452 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 KRT18P57-201ENST00000443599 1254 ntBASIC18.85■□□□□ 0.61
MMP13P45452 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP13P45452 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
MMP13P45452 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP13P45452 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP13P45452 AC024243.1-201ENST00000609234 778 ntBASIC18.85■□□□□ 0.61
MMP13P45452 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
MMP13P45452 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP13P45452 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP13P45452 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP13P45452 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP13P45452 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MMP13P45452 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MMP13P45452 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP13P45452 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP13P45452 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP13P45452 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MMP13P45452 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP13P45452 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.84■□□□□ 0.61
MMP13P45452 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 AC104390.1-201ENST00000555663 520 ntBASIC18.84■□□□□ 0.61
MMP13P45452 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.84■□□□□ 0.61
MMP13P45452 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.84■□□□□ 0.61
MMP13P45452 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.84■□□□□ 0.61
MMP13P45452 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP13P45452 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
MMP13P45452 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
MMP13P45452 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
MMP13P45452 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
MMP13P45452 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MMP13P45452 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MMP13P45452 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MMP13P45452 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
MMP13P45452 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms