Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HTTP42858 AC010460.3-201ENST00000511359 1579 ntBASIC20.27■□□□□ 0.84
HTTP42858 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.27■□□□□ 0.84
HTTP42858 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTTP42858 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTTP42858 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTTP42858 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HTTP42858 GK-202ENST00000378941 458 ntTSL 3 BASIC20.27■□□□□ 0.84
HTTP42858 AC023141.5-201ENST00000458585 616 ntBASIC20.27■□□□□ 0.84
HTTP42858 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.27■□□□□ 0.84
HTTP42858 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.27■□□□□ 0.84
HTTP42858 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.27■□□□□ 0.84
HTTP42858 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTTP42858 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTTP42858 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTTP42858 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTTP42858 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
HTTP42858 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.27■□□□□ 0.83
HTTP42858 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTTP42858 SIGLEC30P-201ENST00000455569 941 ntBASIC20.27■□□□□ 0.83
HTTP42858 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTTP42858 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
HTTP42858 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTTP42858 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
HTTP42858 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.26■□□□□ 0.83
HTTP42858 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 SPDYE21P-201ENST00000413323 827 ntBASIC20.26■□□□□ 0.83
HTTP42858 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.26■□□□□ 0.83
HTTP42858 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 AC063926.2-201ENST00000623766 1308 ntBASIC20.26■□□□□ 0.83
HTTP42858 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTTP42858 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.26■□□□□ 0.83
HTTP42858 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.26■□□□□ 0.83
HTTP42858 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.26■□□□□ 0.83
HTTP42858 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.26■□□□□ 0.83
HTTP42858 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
HTTP42858 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HTTP42858 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.25■□□□□ 0.83
HTTP42858 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.25■□□□□ 0.83
HTTP42858 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.25■□□□□ 0.83
HTTP42858 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.25■□□□□ 0.83
HTTP42858 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 AC009102.3-201ENST00000623118 1491 ntBASIC20.25■□□□□ 0.83
HTTP42858 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.25■□□□□ 0.83
HTTP42858 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.25■□□□□ 0.83
HTTP42858 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
HTTP42858 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HTTP42858 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HTTP42858 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTTP42858 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HTTP42858 DUX4L17-201ENST00000557360 1267 ntBASIC20.25■□□□□ 0.83
HTTP42858 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.25■□□□□ 0.83
HTTP42858 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.24■□□□□ 0.83
HTTP42858 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.24■□□□□ 0.83
HTTP42858 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.24■□□□□ 0.83
HTTP42858 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.24■□□□□ 0.83
HTTP42858 RN7SL204P-201ENST00000582831 262 ntBASIC20.24■□□□□ 0.83
HTTP42858 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.24■□□□□ 0.83
HTTP42858 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.24■□□□□ 0.83
HTTP42858 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.24■□□□□ 0.83
HTTP42858 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 AC010507.1-201ENST00000633895 436 ntBASIC20.24■□□□□ 0.83
HTTP42858 AC092902.6-201ENST00000641783 218 ntBASIC20.24■□□□□ 0.83
HTTP42858 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
HTTP42858 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HTTP42858 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.24■□□□□ 0.83
HTTP42858 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HTTP42858 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms