Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.65□□□□□ -0.06
RPL35P42766 AL591742.1-201ENST00000604433 565 ntBASIC14.65□□□□□ -0.06
RPL35P42766 AC106739.1-201ENST00000617035 715 ntBASIC14.65□□□□□ -0.06
RPL35P42766 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
RPL35P42766 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RPL35P42766 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RPL35P42766 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.65□□□□□ -0.06
RPL35P42766 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 PP12613-201ENST00000424958 2230 ntBASIC14.65□□□□□ -0.06
RPL35P42766 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.65□□□□□ -0.06
RPL35P42766 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.65□□□□□ -0.06
RPL35P42766 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RPL35P42766 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.65□□□□□ -0.06
RPL35P42766 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RPL35P42766 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.64□□□□□ -0.07
RPL35P42766 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RPL35P42766 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
RPL35P42766 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL35P42766 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 MFSD11-216ENST00000590393 1141 ntBASIC14.64□□□□□ -0.07
RPL35P42766 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL35P42766 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RPL35P42766 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.64□□□□□ -0.07
RPL35P42766 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
RPL35P42766 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL35P42766 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 PCDHA14-201ENST00000506751 2298 ntBASIC14.64□□□□□ -0.07
RPL35P42766 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.64□□□□□ -0.07
RPL35P42766 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL35P42766 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL35P42766 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.64□□□□□ -0.07
RPL35P42766 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RPL35P42766 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RPL35P42766 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.63□□□□□ -0.07
RPL35P42766 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
RPL35P42766 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RPL35P42766 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPL35P42766 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RPL35P42766 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPL35P42766 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RPL35P42766 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.63□□□□□ -0.07
RPL35P42766 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.63□□□□□ -0.07
RPL35P42766 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RPL35P42766 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RPL35P42766 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RPL35P42766 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.62□□□□□ -0.07
RPL35P42766 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL35P42766 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RPL35P42766 AC007326.2-201ENST00000624224 7579 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms