Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MDH1P40925 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.22■□□□□ 0.51
MDH1P40925 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MDH1P40925 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MDH1P40925 LINC02199-201ENST00000506655 2702 ntBASIC18.22■□□□□ 0.51
MDH1P40925 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MDH1P40925 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MDH1P40925 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MDH1P40925 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MDH1P40925 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MDH1P40925 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.21■□□□□ 0.51
MDH1P40925 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.21■□□□□ 0.51
MDH1P40925 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MDH1P40925 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MDH1P40925 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MDH1P40925 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MDH1P40925 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.21■□□□□ 0.51
MDH1P40925 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MDH1P40925 AC008741.2-201ENST00000612792 3115 ntBASIC18.21■□□□□ 0.5
MDH1P40925 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MDH1P40925 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.2■□□□□ 0.5
MDH1P40925 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.2■□□□□ 0.5
MDH1P40925 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.2■□□□□ 0.5
MDH1P40925 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.2■□□□□ 0.5
MDH1P40925 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
MDH1P40925 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.2■□□□□ 0.5
MDH1P40925 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MDH1P40925 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.2■□□□□ 0.5
MDH1P40925 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MDH1P40925 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.19■□□□□ 0.5
MDH1P40925 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.19■□□□□ 0.5
MDH1P40925 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.19■□□□□ 0.5
MDH1P40925 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.19■□□□□ 0.5
MDH1P40925 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.19■□□□□ 0.5
MDH1P40925 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MDH1P40925 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.19■□□□□ 0.5
MDH1P40925 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.19■□□□□ 0.5
MDH1P40925 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.19■□□□□ 0.5
MDH1P40925 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MDH1P40925 C1QL1P1-201ENST00000568105 661 ntBASIC18.19■□□□□ 0.5
MDH1P40925 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MDH1P40925 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MDH1P40925 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MDH1P40925 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MDH1P40925 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MDH1P40925 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MDH1P40925 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
MDH1P40925 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
MDH1P40925 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MDH1P40925 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MDH1P40925 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MDH1P40925 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
MDH1P40925 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MDH1P40925 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
MDH1P40925 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MDH1P40925 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MDH1P40925 AC016769.1-201ENST00000409132 1010 ntBASIC18.18■□□□□ 0.5
MDH1P40925 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.18■□□□□ 0.5
MDH1P40925 Z85996.1-201ENST00000494644 937 ntBASIC18.18■□□□□ 0.5
MDH1P40925 PRSS44-201ENST00000515154 1146 ntBASIC18.18■□□□□ 0.5
MDH1P40925 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MDH1P40925 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.18■□□□□ 0.5
MDH1P40925 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.18■□□□□ 0.5
MDH1P40925 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MDH1P40925 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms