Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PDE6BP35913 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PDE6BP35913 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.25■■□□□ 1.15
PDE6BP35913 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PDE6BP35913 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.25■■□□□ 1.15
PDE6BP35913 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 METTL21AP1-201ENST00000438852 635 ntBASIC22.25■■□□□ 1.15
PDE6BP35913 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC22.25■■□□□ 1.15
PDE6BP35913 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
PDE6BP35913 YBX1P5-201ENST00000509441 847 ntBASIC22.25■■□□□ 1.15
PDE6BP35913 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.25■■□□□ 1.15
PDE6BP35913 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.25■■□□□ 1.15
PDE6BP35913 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC22.25■■□□□ 1.15
PDE6BP35913 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PDE6BP35913 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC22.25■■□□□ 1.15
PDE6BP35913 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PDE6BP35913 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PDE6BP35913 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.24■■□□□ 1.15
PDE6BP35913 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE6BP35913 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE6BP35913 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.24■■□□□ 1.15
PDE6BP35913 KRT18P2-201ENST00000447938 1258 ntBASIC22.24■■□□□ 1.15
PDE6BP35913 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.24■■□□□ 1.15
PDE6BP35913 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.24■■□□□ 1.15
PDE6BP35913 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.24■■□□□ 1.15
PDE6BP35913 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.24■■□□□ 1.15
PDE6BP35913 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE6BP35913 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.24■■□□□ 1.15
PDE6BP35913 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE6BP35913 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
PDE6BP35913 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.24■■□□□ 1.15
PDE6BP35913 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PDE6BP35913 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
PDE6BP35913 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PDE6BP35913 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PDE6BP35913 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.23■■□□□ 1.15
PDE6BP35913 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PDE6BP35913 METTL26-205ENST00000397666 726 ntTSL 2 BASIC22.23■■□□□ 1.15
PDE6BP35913 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC22.23■■□□□ 1.15
PDE6BP35913 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.23■■□□□ 1.15
PDE6BP35913 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.23■■□□□ 1.15
PDE6BP35913 SNHG9-202ENST00000564014 471 ntBASIC22.23■■□□□ 1.15
PDE6BP35913 TCAP-202ENST00000578283 583 ntTSL 5 BASIC22.23■■□□□ 1.15
PDE6BP35913 AD001527.2-201ENST00000622994 785 ntBASIC22.23■■□□□ 1.15
PDE6BP35913 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.23■■□□□ 1.15
PDE6BP35913 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PDE6BP35913 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PDE6BP35913 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.23■■□□□ 1.15
PDE6BP35913 SIGLEC16-201ENST00000599858 1437 ntBASIC22.23■■□□□ 1.15
PDE6BP35913 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.22■■□□□ 1.15
PDE6BP35913 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.22■■□□□ 1.15
PDE6BP35913 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PDE6BP35913 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 AC122714.2-201ENST00000502787 707 ntBASIC22.22■■□□□ 1.15
PDE6BP35913 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC22.22■■□□□ 1.15
PDE6BP35913 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PDE6BP35913 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.22■■□□□ 1.15
PDE6BP35913 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 AC002310.6-201ENST00000624451 1377 ntBASIC22.22■■□□□ 1.15
PDE6BP35913 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
PDE6BP35913 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PDE6BP35913 AC007952.6-201ENST00000573168 2673 ntBASIC22.22■■□□□ 1.15
PDE6BP35913 AC003957.1-201ENST00000625108 2673 ntBASIC22.22■■□□□ 1.15
PDE6BP35913 AL049812.1-201ENST00000432563 2267 ntBASIC22.22■■□□□ 1.15
PDE6BP35913 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms