Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.81■□□□□ 0.6
HOXA9P31269 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 AP000867.4-201ENST00000641616 219 ntBASIC18.81■□□□□ 0.6
HOXA9P31269 AC098818.2-201ENST00000564925 2320 ntBASIC18.81■□□□□ 0.6
HOXA9P31269 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA9P31269 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA9P31269 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA9P31269 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA9P31269 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA9P31269 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA9P31269 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXA9P31269 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXA9P31269 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA9P31269 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXA9P31269 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HOXA9P31269 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.8■□□□□ 0.6
HOXA9P31269 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HOXA9P31269 AC008735.5-201ENST00000623544 497 ntBASIC18.8■□□□□ 0.6
HOXA9P31269 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA9P31269 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA9P31269 BX323043.1-201ENST00000641006 1765 ntBASIC18.8■□□□□ 0.6
HOXA9P31269 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
HOXA9P31269 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA9P31269 GMCL1P1-201ENST00000463439 1581 ntBASIC18.8■□□□□ 0.6
HOXA9P31269 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
HOXA9P31269 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA9P31269 ANO7L1-203ENST00000602586 1720 ntBASIC18.8■□□□□ 0.6
HOXA9P31269 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HOXA9P31269 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXA9P31269 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA9P31269 BX842568.4-201ENST00000421222 227 ntBASIC18.79■□□□□ 0.6
HOXA9P31269 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HOXA9P31269 AC092865.5-201ENST00000545435 363 ntBASIC18.79■□□□□ 0.6
HOXA9P31269 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 FAM197Y3-203ENST00000618346 717 ntBASIC18.79■□□□□ 0.6
HOXA9P31269 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXA9P31269 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA9P31269 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXA9P31269 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXA9P31269 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA9P31269 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HOXA9P31269 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HOXA9P31269 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
HOXA9P31269 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA9P31269 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.78■□□□□ 0.6
HOXA9P31269 AL591424.1-201ENST00000442569 1213 ntBASIC18.78■□□□□ 0.6
HOXA9P31269 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXA9P31269 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.78■□□□□ 0.6
HOXA9P31269 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXA9P31269 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.78■□□□□ 0.6
HOXA9P31269 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 AC027601.4-201ENST00000611259 610 ntBASIC18.78■□□□□ 0.6
HOXA9P31269 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HOXA9P31269 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.78■□□□□ 0.6
HOXA9P31269 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
HOXA9P31269 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXA9P31269 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA9P31269 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA9P31269 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA9P31269 AC104109.2-201ENST00000602919 1418 ntBASIC18.77■□□□□ 0.6
HOXA9P31269 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXA9P31269 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms