Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHA3P29320 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHA3P29320 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHA3P29320 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHA3P29320 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.66■□□□□ 0.42
EPHA3P29320 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.66■□□□□ 0.42
EPHA3P29320 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 AC036111.1-201ENST00000533973 1582 ntBASIC17.66■□□□□ 0.42
EPHA3P29320 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA3P29320 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
EPHA3P29320 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EPHA3P29320 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 LINC01126-201ENST00000623515 1646 ntBASIC17.65■□□□□ 0.42
EPHA3P29320 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
EPHA3P29320 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 AL355312.1-201ENST00000407115 2176 ntBASIC17.65■□□□□ 0.42
EPHA3P29320 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 RARRES2P10-201ENST00000564312 460 ntBASIC17.65■□□□□ 0.42
EPHA3P29320 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 MIR3180-5-201ENST00000583743 153 ntBASIC17.65■□□□□ 0.42
EPHA3P29320 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHA3P29320 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EPHA3P29320 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA3P29320 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA3P29320 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.42
EPHA3P29320 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EPHA3P29320 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
EPHA3P29320 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
EPHA3P29320 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHA3P29320 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHA3P29320 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHA3P29320 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHA3P29320 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHA3P29320 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHA3P29320 AP001094.4-201ENST00000579008 2176 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms