Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN3P20807 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CAPN3P20807 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN3P20807 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN3P20807 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN3P20807 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CAPN3P20807 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN3P20807 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN3P20807 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN3P20807 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN3P20807 LINC01568-207ENST00000641790 1380 ntBASIC17.46■□□□□ 0.39
CAPN3P20807 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN3P20807 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN3P20807 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.46■□□□□ 0.39
CAPN3P20807 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN3P20807 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN3P20807 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.46■□□□□ 0.39
CAPN3P20807 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.46■□□□□ 0.39
CAPN3P20807 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.46■□□□□ 0.39
CAPN3P20807 AC073195.1-201ENST00000607241 877 ntBASIC17.46■□□□□ 0.39
CAPN3P20807 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CAPN3P20807 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CAPN3P20807 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CAPN3P20807 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CAPN3P20807 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CAPN3P20807 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.46■□□□□ 0.38
CAPN3P20807 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CAPN3P20807 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN3P20807 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CAPN3P20807 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CAPN3P20807 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN3P20807 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN3P20807 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.45■□□□□ 0.38
CAPN3P20807 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN3P20807 AC093010.1-201ENST00000473625 1624 ntBASIC17.45■□□□□ 0.38
CAPN3P20807 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.45■□□□□ 0.38
CAPN3P20807 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPN3P20807 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CAPN3P20807 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CAPN3P20807 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPN3P20807 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CAPN3P20807 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN3P20807 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN3P20807 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN3P20807 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPN3P20807 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
CAPN3P20807 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CAPN3P20807 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN3P20807 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN3P20807 AL163051.1-201ENST00000569214 1512 ntBASIC17.44■□□□□ 0.38
CAPN3P20807 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CAPN3P20807 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.44■□□□□ 0.38
CAPN3P20807 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPN3P20807 NAPSB-206ENST00000562112 1266 ntBASIC17.44■□□□□ 0.38
CAPN3P20807 AC087388.1-201ENST00000571370 1112 ntBASIC17.44■□□□□ 0.38
CAPN3P20807 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.44■□□□□ 0.38
CAPN3P20807 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CAPN3P20807 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPN3P20807 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms