Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ATP4AP20648 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ATP4AP20648 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.07■□□□□ 0.8
ATP4AP20648 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.07■□□□□ 0.8
ATP4AP20648 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.07■□□□□ 0.8
ATP4AP20648 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.07■□□□□ 0.8
ATP4AP20648 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP4AP20648 MIR5100-201ENST00000579544 119 ntBASIC20.07■□□□□ 0.8
ATP4AP20648 AL031008.1-201ENST00000619963 541 ntBASIC20.07■□□□□ 0.8
ATP4AP20648 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 AC125634.1-201ENST00000438758 1403 ntBASIC20.07■□□□□ 0.8
ATP4AP20648 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP4AP20648 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATP4AP20648 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
ATP4AP20648 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 RCN1P2-201ENST00000398357 915 ntBASIC20.06■□□□□ 0.8
ATP4AP20648 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP4AP20648 FDX1P1-201ENST00000449115 551 ntBASIC20.06■□□□□ 0.8
ATP4AP20648 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP4AP20648 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP4AP20648 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP4AP20648 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.06■□□□□ 0.8
ATP4AP20648 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP4AP20648 AC112698.1-201ENST00000510299 916 ntBASIC20.06■□□□□ 0.8
ATP4AP20648 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP4AP20648 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP4AP20648 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP4AP20648 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP4AP20648 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP4AP20648 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP4AP20648 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.06■□□□□ 0.8
ATP4AP20648 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.06■□□□□ 0.8
ATP4AP20648 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 AC093677.2-201ENST00000600169 1863 ntBASIC20.05■□□□□ 0.8
ATP4AP20648 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATP4AP20648 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.05■□□□□ 0.8
ATP4AP20648 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP4AP20648 FAAHP1-202ENST00000446499 1238 ntBASIC20.05■□□□□ 0.8
ATP4AP20648 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP4AP20648 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP4AP20648 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP4AP20648 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.05■□□□□ 0.8
ATP4AP20648 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATP4AP20648 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP4AP20648 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.05■□□□□ 0.8
ATP4AP20648 TP73-AS1-210ENST00000637775 1455 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms