Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHRM3P20309 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.07■□□□□ 0.48
CHRM3P20309 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHRM3P20309 MIR3917-201ENST00000580971 93 ntBASIC18.07■□□□□ 0.48
CHRM3P20309 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRM3P20309 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRM3P20309 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHRM3P20309 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRM3P20309 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRM3P20309 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CHRM3P20309 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CHRM3P20309 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 AC113347.1-201ENST00000413321 391 ntBASIC18.06■□□□□ 0.48
CHRM3P20309 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRM3P20309 GCSHP2-201ENST00000560971 527 ntBASIC18.06■□□□□ 0.48
CHRM3P20309 AL023973.1-201ENST00000624619 620 ntBASIC18.06■□□□□ 0.48
CHRM3P20309 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 AL031432.5-201ENST00000641059 760 ntBASIC18.06■□□□□ 0.48
CHRM3P20309 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHRM3P20309 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRM3P20309 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CHRM3P20309 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHRM3P20309 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRM3P20309 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 LINC01126-201ENST00000623515 1646 ntBASIC18.05■□□□□ 0.48
CHRM3P20309 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRM3P20309 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRM3P20309 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 COX11P1-201ENST00000489116 835 ntBASIC18.05■□□□□ 0.48
CHRM3P20309 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CHRM3P20309 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.05■□□□□ 0.48
CHRM3P20309 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRM3P20309 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CHRM3P20309 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHRM3P20309 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRM3P20309 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHRM3P20309 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRM3P20309 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRM3P20309 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRM3P20309 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRM3P20309 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRM3P20309 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRM3P20309 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRM3P20309 TERF1P1-201ENST00000311003 1181 ntBASIC18.04■□□□□ 0.48
CHRM3P20309 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRM3P20309 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRM3P20309 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.04■□□□□ 0.48
CHRM3P20309 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRM3P20309 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRM3P20309 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRM3P20309 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.04■□□□□ 0.48
CHRM3P20309 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHRM3P20309 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHRM3P20309 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHRM3P20309 LINC01023-201ENST00000606054 436 ntBASIC18.04■□□□□ 0.48
CHRM3P20309 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHRM3P20309 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms