Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RHOP08100 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RHOP08100 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.72■□□□□ 0.59
RHOP08100 AC025062.2-201ENST00000605477 670 ntBASIC18.72■□□□□ 0.59
RHOP08100 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RHOP08100 AC104109.2-201ENST00000602919 1418 ntBASIC18.72■□□□□ 0.59
RHOP08100 AC132938.6-201ENST00000623828 1655 ntBASIC18.72■□□□□ 0.59
RHOP08100 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.72■□□□□ 0.59
RHOP08100 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.71■□□□□ 0.59
RHOP08100 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.71■□□□□ 0.59
RHOP08100 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 FAM220CP-201ENST00000395253 831 ntBASIC18.71■□□□□ 0.59
RHOP08100 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RHOP08100 AC092910.1-201ENST00000482027 1129 ntBASIC18.71■□□□□ 0.59
RHOP08100 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.71■□□□□ 0.59
RHOP08100 AC012640.2-201ENST00000561606 901 ntBASIC18.71■□□□□ 0.59
RHOP08100 AC145285.3-201ENST00000564603 959 ntBASIC18.71■□□□□ 0.59
RHOP08100 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RHOP08100 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.71■□□□□ 0.59
RHOP08100 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RHOP08100 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RHOP08100 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RHOP08100 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RHOP08100 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RHOP08100 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.7■□□□□ 0.58
RHOP08100 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 AC007967.3-201ENST00000434308 558 ntBASIC18.7■□□□□ 0.58
RHOP08100 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.7■□□□□ 0.58
RHOP08100 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 NKAPP1-205ENST00000585790 367 ntBASIC18.7■□□□□ 0.58
RHOP08100 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.7■□□□□ 0.58
RHOP08100 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RHOP08100 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RHOP08100 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RHOP08100 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.69■□□□□ 0.58
RHOP08100 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RHOP08100 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RHOP08100 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RHOP08100 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.69■□□□□ 0.58
RHOP08100 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.69■□□□□ 0.58
RHOP08100 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RHOP08100 BX842568.4-201ENST00000421222 227 ntBASIC18.69■□□□□ 0.58
RHOP08100 AC098831.1-202ENST00000438821 336 ntBASIC18.69■□□□□ 0.58
RHOP08100 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.69■□□□□ 0.58
RHOP08100 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.69■□□□□ 0.58
RHOP08100 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 AP000867.4-201ENST00000641616 219 ntBASIC18.69■□□□□ 0.58
RHOP08100 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 ESPNP-201ENST00000270691 2015 ntBASIC18.69■□□□□ 0.58
RHOP08100 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms