Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.27■□□□□ 0.51
RETP07949 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RETP07949 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RETP07949 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RETP07949 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RETP07949 AC008556.1-201ENST00000610908 2040 ntBASIC18.27■□□□□ 0.51
RETP07949 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RETP07949 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RETP07949 KRT89P-201ENST00000620027 1478 ntBASIC18.26■□□□□ 0.51
RETP07949 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RETP07949 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RETP07949 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.26■□□□□ 0.51
RETP07949 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 RPSAP43-201ENST00000402237 625 ntBASIC18.26■□□□□ 0.51
RETP07949 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RETP07949 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.26■□□□□ 0.51
RETP07949 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.26■□□□□ 0.51
RETP07949 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.26■□□□□ 0.51
RETP07949 MIR3687-2-201ENST00000577708 61 ntBASIC18.26■□□□□ 0.51
RETP07949 MIR3687-1-201ENST00000614492 61 ntBASIC18.26■□□□□ 0.51
RETP07949 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RETP07949 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RETP07949 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.26■□□□□ 0.51
RETP07949 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.26■□□□□ 0.51
RETP07949 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
RETP07949 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RETP07949 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RETP07949 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.25■□□□□ 0.51
RETP07949 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RETP07949 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
RETP07949 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.25■□□□□ 0.51
RETP07949 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.25■□□□□ 0.51
RETP07949 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RETP07949 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RETP07949 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.25■□□□□ 0.51
RETP07949 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.25■□□□□ 0.51
RETP07949 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 RBM17P3-201ENST00000417687 1192 ntBASIC18.25■□□□□ 0.51
RETP07949 MED15P5-201ENST00000423150 992 ntBASIC18.25■□□□□ 0.51
RETP07949 GPX1P2-201ENST00000429271 606 ntBASIC18.25■□□□□ 0.51
RETP07949 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.25■□□□□ 0.51
RETP07949 AL591424.1-201ENST00000442569 1213 ntBASIC18.25■□□□□ 0.51
RETP07949 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.25■□□□□ 0.51
RETP07949 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.25■□□□□ 0.51
RETP07949 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.25■□□□□ 0.51
RETP07949 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.25■□□□□ 0.51
RETP07949 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
RETP07949 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RETP07949 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.25■□□□□ 0.51
RETP07949 TEX21P-204ENST00000641479 1693 ntBASIC18.25■□□□□ 0.51
RETP07949 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
RETP07949 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 AC104109.2-201ENST00000602919 1418 ntBASIC18.24■□□□□ 0.51
RETP07949 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RETP07949 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 AC005082.1-201ENST00000413042 2259 ntBASIC18.24■□□□□ 0.51
RETP07949 AL049812.1-201ENST00000432563 2267 ntBASIC18.24■□□□□ 0.51
RETP07949 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.24■□□□□ 0.51
RETP07949 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.24■□□□□ 0.51
RETP07949 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RETP07949 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.24■□□□□ 0.51
RETP07949 HNRNPDP1-201ENST00000439535 754 ntBASIC18.24■□□□□ 0.51
RETP07949 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.24■□□□□ 0.51
RETP07949 FGFR3P6-201ENST00000457012 610 ntBASIC18.24■□□□□ 0.51
RETP07949 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms