Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.08■□□□□ 0
CTSDP07339 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CTSDP07339 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CTSDP07339 AL163051.1-201ENST00000569214 1512 ntBASIC15.07■□□□□ 0
CTSDP07339 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.07■□□□□ 0
CTSDP07339 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CTSDP07339 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.07■□□□□ 0
CTSDP07339 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.07■□□□□ 0
CTSDP07339 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 AC239809.2-201ENST00000415381 517 ntBASIC15.07■□□□□ 0
CTSDP07339 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CTSDP07339 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.07■□□□□ 0
CTSDP07339 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.07■□□□□ 0
CTSDP07339 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.07■□□□□ 0
CTSDP07339 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.07■□□□□ 0
CTSDP07339 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.07■□□□□ 0
CTSDP07339 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CTSDP07339 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CTSDP07339 AL355312.1-201ENST00000407115 2176 ntBASIC15.07■□□□□ 0
CTSDP07339 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CTSDP07339 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.07■□□□□ 0
CTSDP07339 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.07■□□□□ 0
CTSDP07339 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.06■□□□□ 0
CTSDP07339 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.06■□□□□ 0
CTSDP07339 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTSDP07339 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.06■□□□□ 0
CTSDP07339 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.06■□□□□ 0
CTSDP07339 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
CTSDP07339 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 KSR1P1-201ENST00000446298 240 ntBASIC15.06■□□□□ 0
CTSDP07339 FAM207BP-201ENST00000447172 505 ntBASIC15.06■□□□□ 0
CTSDP07339 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.06■□□□□ 0
CTSDP07339 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 RNA5SP413-201ENST00000516373 109 ntBASIC15.06■□□□□ 0
CTSDP07339 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.06■□□□□ 0
CTSDP07339 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CTSDP07339 AL353708.3-201ENST00000610272 989 ntBASIC15.06■□□□□ 0
CTSDP07339 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CTSDP07339 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.06■□□□□ 0
CTSDP07339 AL023875.1-201ENST00000640777 796 ntBASIC15.06■□□□□ 0
CTSDP07339 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.06■□□□□ 0
CTSDP07339 AC011676.5-201ENST00000624864 2660 ntBASIC15.06■□□□□ 0
CTSDP07339 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CTSDP07339 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.06■□□□□ 0
CTSDP07339 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.06■□□□□ 0
CTSDP07339 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.05■□□□□ 0
CTSDP07339 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.05■□□□□ 0
CTSDP07339 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
CTSDP07339 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ 0
CTSDP07339 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CTSDP07339 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CTSDP07339 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.05■□□□□ 0
CTSDP07339 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.05■□□□□ 0
CTSDP07339 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 TNRC18P3-201ENST00000441896 2691 ntBASIC15.05■□□□□ 0
CTSDP07339 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CTSDP07339 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CTSDP07339 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
CTSDP07339 AP002982.1-201ENST00000492365 877 ntBASIC15.05■□□□□ -0
CTSDP07339 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.05■□□□□ -0
CTSDP07339 KRT18P6-201ENST00000555540 1265 ntBASIC15.05■□□□□ -0
CTSDP07339 AC026271.3-201ENST00000571884 352 ntBASIC15.05■□□□□ -0
CTSDP07339 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.05■□□□□ -0
CTSDP07339 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CTSDP07339 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CTSDP07339 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms