Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.76■■□□□ 1.07
CHGBP05060 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.76■■□□□ 1.07
CHGBP05060 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.76■■□□□ 1.07
CHGBP05060 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.76■■□□□ 1.07
CHGBP05060 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.76■■□□□ 1.07
CHGBP05060 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHGBP05060 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.76■■□□□ 1.07
CHGBP05060 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 ABALON-201ENST00000629058 1903 ntBASIC21.76■■□□□ 1.07
CHGBP05060 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
CHGBP05060 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHGBP05060 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
CHGBP05060 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CHGBP05060 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.75■■□□□ 1.07
CHGBP05060 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHGBP05060 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 DRAXINP1-201ENST00000437611 948 ntBASIC21.75■■□□□ 1.07
CHGBP05060 LINC00265-3P-201ENST00000447588 903 ntBASIC21.75■■□□□ 1.07
CHGBP05060 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 KRT18P56-201ENST00000507275 550 ntBASIC21.75■■□□□ 1.07
CHGBP05060 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 AC092329.2-201ENST00000598402 547 ntBASIC21.75■■□□□ 1.07
CHGBP05060 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CHGBP05060 AL390961.4-201ENST00000623958 2535 ntBASIC21.75■■□□□ 1.07
CHGBP05060 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHGBP05060 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.75■■□□□ 1.07
CHGBP05060 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.74■■□□□ 1.07
CHGBP05060 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CHGBP05060 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.74■■□□□ 1.07
CHGBP05060 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CHGBP05060 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 TSPY12P-201ENST00000421279 868 ntBASIC21.74■■□□□ 1.07
CHGBP05060 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
CHGBP05060 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.74■■□□□ 1.07
CHGBP05060 AC005336.2-201ENST00000593183 939 ntBASIC21.74■■□□□ 1.07
CHGBP05060 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHGBP05060 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.74■■□□□ 1.07
CHGBP05060 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.74■■□□□ 1.07
CHGBP05060 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHGBP05060 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.74■■□□□ 1.07
CHGBP05060 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHGBP05060 AL133373.2-201ENST00000623187 2828 ntBASIC21.74■■□□□ 1.07
CHGBP05060 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.74■■□□□ 1.07
CHGBP05060 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.73■■□□□ 1.07
CHGBP05060 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHGBP05060 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHGBP05060 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.73■■□□□ 1.07
CHGBP05060 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CHGBP05060 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.73■■□□□ 1.07
CHGBP05060 CLEC4GP1-201ENST00000596555 870 ntBASIC21.73■■□□□ 1.07
CHGBP05060 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms