Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.81■□□□□ 0.76
VTNP04004 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.81■□□□□ 0.76
VTNP04004 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
VTNP04004 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
VTNP04004 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.81■□□□□ 0.76
VTNP04004 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VTNP04004 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.81■□□□□ 0.76
VTNP04004 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.81■□□□□ 0.76
VTNP04004 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VTNP04004 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.81■□□□□ 0.76
VTNP04004 AC106795.1-205ENST00000512851 1056 ntBASIC19.81■□□□□ 0.76
VTNP04004 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.81■□□□□ 0.76
VTNP04004 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.81■□□□□ 0.76
VTNP04004 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
VTNP04004 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VTNP04004 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VTNP04004 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.81■□□□□ 0.76
VTNP04004 WIZP1-201ENST00000531444 2299 ntBASIC19.81■□□□□ 0.76
VTNP04004 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.81■□□□□ 0.76
VTNP04004 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 AC018445.3-201ENST00000624177 1945 ntBASIC19.8■□□□□ 0.76
VTNP04004 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.8■□□□□ 0.76
VTNP04004 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VTNP04004 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
VTNP04004 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VTNP04004 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
VTNP04004 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.8■□□□□ 0.76
VTNP04004 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.8■□□□□ 0.76
VTNP04004 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
VTNP04004 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.8■□□□□ 0.76
VTNP04004 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.8■□□□□ 0.76
VTNP04004 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VTNP04004 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.8■□□□□ 0.76
VTNP04004 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.8■□□□□ 0.76
VTNP04004 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.8■□□□□ 0.76
VTNP04004 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.8■□□□□ 0.76
VTNP04004 AC093503.3-201ENST00000624917 2352 ntBASIC19.8■□□□□ 0.76
VTNP04004 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VTNP04004 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.8■□□□□ 0.76
VTNP04004 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.8■□□□□ 0.76
VTNP04004 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VTNP04004 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
VTNP04004 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.79■□□□□ 0.76
VTNP04004 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 INTS4P1-201ENST00000438455 1935 ntBASIC19.79■□□□□ 0.76
VTNP04004 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.79■□□□□ 0.76
VTNP04004 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 AC008608.2-201ENST00000606089 416 ntBASIC19.79■□□□□ 0.76
VTNP04004 AC087289.5-201ENST00000586076 3175 ntBASIC19.79■□□□□ 0.76
VTNP04004 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VTNP04004 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
VTNP04004 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VTNP04004 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
VTNP04004 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VTNP04004 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VTNP04004 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
VTNP04004 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms