Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AP000550.4-202ENST00000639755 178 ntBASIC19■□□□□ 0.63
APOEP02649 IER3-202ENST00000376377 1350 ntBASIC19■□□□□ 0.63
APOEP02649 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19■□□□□ 0.63
APOEP02649 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19■□□□□ 0.63
APOEP02649 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
APOEP02649 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19■□□□□ 0.63
APOEP02649 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19■□□□□ 0.63
APOEP02649 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
APOEP02649 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19■□□□□ 0.63
APOEP02649 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
APOEP02649 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOEP02649 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
APOEP02649 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.99■□□□□ 0.63
APOEP02649 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
APOEP02649 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.99■□□□□ 0.63
APOEP02649 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.99■□□□□ 0.63
APOEP02649 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.99■□□□□ 0.63
APOEP02649 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.99■□□□□ 0.63
APOEP02649 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
APOEP02649 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.99■□□□□ 0.63
APOEP02649 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOEP02649 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
APOEP02649 AL162741.1-201ENST00000565563 1558 ntBASIC18.98■□□□□ 0.63
APOEP02649 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.98■□□□□ 0.63
APOEP02649 ABALON-201ENST00000629058 1903 ntBASIC18.98■□□□□ 0.63
APOEP02649 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.98■□□□□ 0.63
APOEP02649 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.98■□□□□ 0.63
APOEP02649 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.98■□□□□ 0.63
APOEP02649 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
APOEP02649 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.98■□□□□ 0.63
APOEP02649 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.98■□□□□ 0.63
APOEP02649 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.98■□□□□ 0.63
APOEP02649 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.98■□□□□ 0.63
APOEP02649 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOEP02649 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.98■□□□□ 0.63
APOEP02649 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.98■□□□□ 0.63
APOEP02649 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 AL133373.2-201ENST00000623187 2828 ntBASIC18.97■□□□□ 0.63
APOEP02649 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.97■□□□□ 0.63
APOEP02649 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
APOEP02649 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.97■□□□□ 0.63
APOEP02649 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
APOEP02649 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.97■□□□□ 0.63
APOEP02649 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.97■□□□□ 0.63
APOEP02649 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.97■□□□□ 0.63
APOEP02649 AP003733.1-201ENST00000491725 852 ntBASIC18.97■□□□□ 0.63
APOEP02649 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.97■□□□□ 0.63
APOEP02649 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.97■□□□□ 0.63
APOEP02649 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOEP02649 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms