Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TRBC1P01850 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRBC1P01850 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBC1P01850 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBC1P01850 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
TRBC1P01850 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBC1P01850 REXO1L9P-201ENST00000604264 2108 ntBASIC18.14■□□□□ 0.5
TRBC1P01850 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBC1P01850 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBC1P01850 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBC1P01850 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBC1P01850 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRBC1P01850 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBC1P01850 TSPY12P-201ENST00000421279 868 ntBASIC18.14■□□□□ 0.49
TRBC1P01850 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBC1P01850 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.14■□□□□ 0.49
TRBC1P01850 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBC1P01850 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBC1P01850 AC009154.2-201ENST00000621177 724 ntBASIC18.14■□□□□ 0.49
TRBC1P01850 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBC1P01850 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBC1P01850 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBC1P01850 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBC1P01850 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TRBC1P01850 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBC1P01850 AL354751.1-201ENST00000412768 1863 ntBASIC18.14■□□□□ 0.49
TRBC1P01850 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBC1P01850 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 NEFHP1-201ENST00000412845 2629 ntBASIC18.13■□□□□ 0.49
TRBC1P01850 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBC1P01850 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBC1P01850 UPK3BP1-201ENST00000428678 509 ntBASIC18.13■□□□□ 0.49
TRBC1P01850 CHCHD2P8-201ENST00000429873 447 ntBASIC18.13■□□□□ 0.49
TRBC1P01850 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBC1P01850 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 KRT18P65-201ENST00000439811 1286 ntBASIC18.13■□□□□ 0.49
TRBC1P01850 TSSC2-201ENST00000450217 709 ntBASIC18.13■□□□□ 0.49
TRBC1P01850 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBC1P01850 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRBC1P01850 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRBC1P01850 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBC1P01850 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBC1P01850 AC090616.6-201ENST00000582640 721 ntBASIC18.13■□□□□ 0.49
TRBC1P01850 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBC1P01850 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.13■□□□□ 0.49
TRBC1P01850 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBC1P01850 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBC1P01850 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBC1P01850 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRBC1P01850 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBC1P01850 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBC1P01850 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBC1P01850 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBC1P01850 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRBC1P01850 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRBC1P01850 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRBC1P01850 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBC1P01850 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBC1P01850 GUSBP12-201ENST00000513727 720 ntBASIC18.12■□□□□ 0.49
TRBC1P01850 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.12■□□□□ 0.49
TRBC1P01850 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBC1P01850 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms