Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
IFNB1P01574 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
IFNB1P01574 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.79■□□□□ 0.6
IFNB1P01574 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.79■□□□□ 0.6
IFNB1P01574 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
IFNB1P01574 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.79■□□□□ 0.6
IFNB1P01574 MIR1238-201ENST00000408483 83 ntBASIC18.79■□□□□ 0.6
IFNB1P01574 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.79■□□□□ 0.6
IFNB1P01574 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.79■□□□□ 0.6
IFNB1P01574 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
IFNB1P01574 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.79■□□□□ 0.6
IFNB1P01574 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.79■□□□□ 0.6
IFNB1P01574 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
IFNB1P01574 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.79■□□□□ 0.6
IFNB1P01574 AC092338.2-201ENST00000568827 1415 ntBASIC18.79■□□□□ 0.6
IFNB1P01574 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.79■□□□□ 0.6
IFNB1P01574 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
IFNB1P01574 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.79■□□□□ 0.6
IFNB1P01574 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
IFNB1P01574 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IFNB1P01574 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.78■□□□□ 0.6
IFNB1P01574 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.78■□□□□ 0.6
IFNB1P01574 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.78■□□□□ 0.6
IFNB1P01574 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.78■□□□□ 0.6
IFNB1P01574 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 AC012317.2-201ENST00000623305 2251 ntBASIC18.78■□□□□ 0.6
IFNB1P01574 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
IFNB1P01574 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.78■□□□□ 0.6
IFNB1P01574 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
IFNB1P01574 BX088651.1-201ENST00000540551 451 ntBASIC18.78■□□□□ 0.6
IFNB1P01574 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.78■□□□□ 0.6
IFNB1P01574 FITM1-202ENST00000559294 800 ntBASIC18.78■□□□□ 0.6
IFNB1P01574 WWOX-216ENST00000569818 525 ntBASIC18.78■□□□□ 0.6
IFNB1P01574 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.78■□□□□ 0.6
IFNB1P01574 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 AC116562.4-202ENST00000641738 218 ntBASIC18.78■□□□□ 0.6
IFNB1P01574 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
IFNB1P01574 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.78■□□□□ 0.6
IFNB1P01574 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
IFNB1P01574 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.78■□□□□ 0.6
IFNB1P01574 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IFNB1P01574 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.77■□□□□ 0.6
IFNB1P01574 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
IFNB1P01574 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.77■□□□□ 0.6
IFNB1P01574 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.77■□□□□ 0.6
IFNB1P01574 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IFNB1P01574 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
IFNB1P01574 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
IFNB1P01574 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
IFNB1P01574 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
IFNB1P01574 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IFNB1P01574 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
IFNB1P01574 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IFNB1P01574 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms