Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.12■□□□□ 0.17
CNOT4O95628 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.12■□□□□ 0.17
CNOT4O95628 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.12■□□□□ 0.17
CNOT4O95628 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.12■□□□□ 0.17
CNOT4O95628 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.12■□□□□ 0.17
CNOT4O95628 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.12■□□□□ 0.17
CNOT4O95628 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.12■□□□□ 0.17
CNOT4O95628 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.12■□□□□ 0.17
CNOT4O95628 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.12■□□□□ 0.17
CNOT4O95628 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CNOT4O95628 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CNOT4O95628 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CNOT4O95628 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNOT4O95628 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.11■□□□□ 0.17
CNOT4O95628 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CNOT4O95628 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
CNOT4O95628 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CNOT4O95628 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNOT4O95628 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.11■□□□□ 0.17
CNOT4O95628 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.11■□□□□ 0.17
CNOT4O95628 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.11■□□□□ 0.17
CNOT4O95628 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.11■□□□□ 0.17
CNOT4O95628 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 BX276092.5-203ENST00000456199 560 ntBASIC16.11■□□□□ 0.17
CNOT4O95628 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.11■□□□□ 0.17
CNOT4O95628 GPR32P1-201ENST00000601788 811 ntBASIC16.11■□□□□ 0.17
CNOT4O95628 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.11■□□□□ 0.17
CNOT4O95628 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNOT4O95628 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
CNOT4O95628 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNOT4O95628 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CNOT4O95628 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNOT4O95628 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.11■□□□□ 0.17
CNOT4O95628 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CNOT4O95628 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CNOT4O95628 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CNOT4O95628 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CNOT4O95628 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
CNOT4O95628 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.1■□□□□ 0.17
CNOT4O95628 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 IGHGP-201ENST00000390555 1178 ntBASIC16.1■□□□□ 0.17
CNOT4O95628 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.1■□□□□ 0.17
CNOT4O95628 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 AC012313.10-201ENST00000623509 926 ntBASIC16.1■□□□□ 0.17
CNOT4O95628 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CNOT4O95628 AC073592.3-201ENST00000625118 1834 ntBASIC16.1■□□□□ 0.17
CNOT4O95628 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNOT4O95628 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.1■□□□□ 0.17
CNOT4O95628 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNOT4O95628 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNOT4O95628 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms