Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CSPG5O95196 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSPG5O95196 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CSPG5O95196 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSPG5O95196 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CSPG5O95196 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CSPG5O95196 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.43■□□□□ 0.7
CSPG5O95196 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.43■□□□□ 0.7
CSPG5O95196 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CSPG5O95196 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.43■□□□□ 0.7
CSPG5O95196 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.43■□□□□ 0.7
CSPG5O95196 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.43■□□□□ 0.7
CSPG5O95196 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.43■□□□□ 0.7
CSPG5O95196 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.43■□□□□ 0.7
CSPG5O95196 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CSPG5O95196 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CSPG5O95196 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSPG5O95196 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
CSPG5O95196 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 AL163051.1-201ENST00000569214 1512 ntBASIC19.42■□□□□ 0.7
CSPG5O95196 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.42■□□□□ 0.7
CSPG5O95196 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CSPG5O95196 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
CSPG5O95196 RPS2P1-201ENST00000434010 821 ntBASIC19.42■□□□□ 0.7
CSPG5O95196 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.42■□□□□ 0.7
CSPG5O95196 AC092910.1-201ENST00000482027 1129 ntBASIC19.42■□□□□ 0.7
CSPG5O95196 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.42■□□□□ 0.7
CSPG5O95196 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.42■□□□□ 0.7
CSPG5O95196 AC010327.4-202ENST00000591484 748 ntBASIC19.42■□□□□ 0.7
CSPG5O95196 AL355877.3-201ENST00000622820 899 ntBASIC19.42■□□□□ 0.7
CSPG5O95196 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.42■□□□□ 0.7
CSPG5O95196 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.42■□□□□ 0.7
CSPG5O95196 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CSPG5O95196 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.42■□□□□ 0.7
CSPG5O95196 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSPG5O95196 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 HEIH-201ENST00000623091 1652 ntBASIC19.41■□□□□ 0.7
CSPG5O95196 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.41■□□□□ 0.7
CSPG5O95196 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.41■□□□□ 0.7
CSPG5O95196 AC055717.3-201ENST00000622967 595 ntBASIC19.41■□□□□ 0.7
CSPG5O95196 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CSPG5O95196 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.41■□□□□ 0.7
CSPG5O95196 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.41■□□□□ 0.7
CSPG5O95196 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
CSPG5O95196 KRT89P-201ENST00000620027 1478 ntBASIC19.41■□□□□ 0.7
CSPG5O95196 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSPG5O95196 MTMR9LP-203ENST00000426597 1545 ntBASIC19.41■□□□□ 0.7
CSPG5O95196 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG5O95196 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.4■□□□□ 0.7
CSPG5O95196 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG5O95196 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG5O95196 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.4■□□□□ 0.7
CSPG5O95196 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG5O95196 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CSPG5O95196 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG5O95196 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CSPG5O95196 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms