Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.9■■□□□ 1.42
LTN1O94822 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LTN1O94822 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
LTN1O94822 NCF1C-201ENST00000438382 1427 ntBASIC23.9■■□□□ 1.42
LTN1O94822 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
LTN1O94822 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
LTN1O94822 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC23.89■■□□□ 1.42
LTN1O94822 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.89■■□□□ 1.42
LTN1O94822 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
LTN1O94822 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.89■■□□□ 1.42
LTN1O94822 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC23.89■■□□□ 1.42
LTN1O94822 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
LTN1O94822 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.89■■□□□ 1.41
LTN1O94822 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
LTN1O94822 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LTN1O94822 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.89■■□□□ 1.41
LTN1O94822 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.89■■□□□ 1.41
LTN1O94822 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
LTN1O94822 PHGDH-209ENST00000641074 1780 ntBASIC23.88■■□□□ 1.41
LTN1O94822 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
LTN1O94822 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.88■■□□□ 1.41
LTN1O94822 PMS2P2-201ENST00000425039 1128 ntBASIC23.88■■□□□ 1.41
LTN1O94822 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.88■■□□□ 1.41
LTN1O94822 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.88■■□□□ 1.41
LTN1O94822 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.88■■□□□ 1.41
LTN1O94822 AC002347.1-201ENST00000569543 541 ntBASIC23.88■■□□□ 1.41
LTN1O94822 AC006557.2-201ENST00000592985 1240 ntBASIC23.88■■□□□ 1.41
LTN1O94822 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.88■■□□□ 1.41
LTN1O94822 AL691403.2-201ENST00000618460 490 ntBASIC23.88■■□□□ 1.41
LTN1O94822 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.88■■□□□ 1.41
LTN1O94822 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
LTN1O94822 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.88■■□□□ 1.41
LTN1O94822 AL353593.2-201ENST00000602529 1483 ntBASIC23.88■■□□□ 1.41
LTN1O94822 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LTN1O94822 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
LTN1O94822 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LTN1O94822 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
LTN1O94822 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LTN1O94822 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
LTN1O94822 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LTN1O94822 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.88■■□□□ 1.41
LTN1O94822 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.88■■□□□ 1.41
LTN1O94822 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.88■■□□□ 1.41
LTN1O94822 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LTN1O94822 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LTN1O94822 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
LTN1O94822 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LTN1O94822 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LTN1O94822 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LTN1O94822 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LTN1O94822 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LTN1O94822 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.87■■□□□ 1.41
LTN1O94822 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LTN1O94822 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC23.87■■□□□ 1.41
LTN1O94822 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC23.87■■□□□ 1.41
LTN1O94822 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
LTN1O94822 AC136632.2-201ENST00000512891 861 ntBASIC23.87■■□□□ 1.41
LTN1O94822 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
LTN1O94822 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LTN1O94822 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.87■■□□□ 1.41
LTN1O94822 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LTN1O94822 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
LTN1O94822 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.86■■□□□ 1.41
LTN1O94822 AC108073.2-201ENST00000464002 357 ntBASIC23.86■■□□□ 1.41
LTN1O94822 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.86■■□□□ 1.41
LTN1O94822 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 CROCCP3-202ENST00000420820 1947 ntBASIC23.86■■□□□ 1.41
LTN1O94822 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC23.86■■□□□ 1.41
LTN1O94822 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.86■■□□□ 1.41
LTN1O94822 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
LTN1O94822 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.86■■□□□ 1.41
LTN1O94822 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LTN1O94822 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC23.86■■□□□ 1.41
LTN1O94822 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.86■■□□□ 1.41
LTN1O94822 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.86■■□□□ 1.41
LTN1O94822 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
LTN1O94822 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
LTN1O94822 AC097374.2-201ENST00000618617 1306 ntBASIC23.85■■□□□ 1.41
LTN1O94822 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.85■■□□□ 1.41
LTN1O94822 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.85■■□□□ 1.41
LTN1O94822 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.85■■□□□ 1.41
LTN1O94822 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
LTN1O94822 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
LTN1O94822 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LTN1O94822 SPDYE21P-201ENST00000413323 827 ntBASIC23.85■■□□□ 1.41
LTN1O94822 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.85■■□□□ 1.41
LTN1O94822 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LTN1O94822 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms