Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.81■□□□□ 0.12
UPK1BO75841 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.81■□□□□ 0.12
UPK1BO75841 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.81■□□□□ 0.12
UPK1BO75841 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.81■□□□□ 0.12
UPK1BO75841 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 AP006587.1-201ENST00000534129 1502 ntBASIC15.81■□□□□ 0.12
UPK1BO75841 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UPK1BO75841 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.81■□□□□ 0.12
UPK1BO75841 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.81■□□□□ 0.12
UPK1BO75841 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.81■□□□□ 0.12
UPK1BO75841 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
UPK1BO75841 MIR6084-201ENST00000622012 110 ntBASIC15.81■□□□□ 0.12
UPK1BO75841 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
UPK1BO75841 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UPK1BO75841 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.8■□□□□ 0.12
UPK1BO75841 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.8■□□□□ 0.12
UPK1BO75841 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
UPK1BO75841 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UPK1BO75841 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.8■□□□□ 0.12
UPK1BO75841 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.8■□□□□ 0.12
UPK1BO75841 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
UPK1BO75841 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UPK1BO75841 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UPK1BO75841 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UPK1BO75841 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UPK1BO75841 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UPK1BO75841 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.79■□□□□ 0.12
UPK1BO75841 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 AL513523.2-202ENST00000427283 2040 ntBASIC15.79■□□□□ 0.12
UPK1BO75841 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UPK1BO75841 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.79■□□□□ 0.12
UPK1BO75841 RARRES2P4-201ENST00000514074 484 ntBASIC15.79■□□□□ 0.12
UPK1BO75841 AC131281.2-201ENST00000520478 145 ntBASIC15.79■□□□□ 0.12
UPK1BO75841 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.79■□□□□ 0.12
UPK1BO75841 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 CYP2T3P-201ENST00000601990 817 ntBASIC15.79■□□□□ 0.12
UPK1BO75841 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
UPK1BO75841 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 CYP2T1P-202ENST00000641596 2535 ntBASIC15.79■□□□□ 0.12
UPK1BO75841 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UPK1BO75841 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.79■□□□□ 0.12
UPK1BO75841 AC060834.1-201ENST00000443027 2032 ntBASIC15.78■□□□□ 0.12
UPK1BO75841 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UPK1BO75841 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UPK1BO75841 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.78■□□□□ 0.12
UPK1BO75841 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UPK1BO75841 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UPK1BO75841 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UPK1BO75841 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
UPK1BO75841 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms